Analysis of interatomic Contacts of Structural Units in PDB entry:
4I5U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4I5U entry

There is 1 chain in PDB entry 4I5U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 90LEU 447
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 4I5U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
101 111Right-handed alpha
Helix 2
2
A
112 116Right-handed 310
Helix 3
3
A
118 129Right-handed alpha
Helix 4
4
A
139 141Right-handed 310
Helix 5
5
A
142 159Right-handed alpha
Helix 6
6
A
187 190Right-handed 310
Helix 7
7
A
191 210Right-handed alpha
Helix 8
8
A
223 230Right-handed alpha
Helix 9
9
A
233 254Right-handed alpha
Helix 10
10
A
267 272Right-handed alpha
Helix 11
11
A
273 291Right-handed alpha
Helix 12
12
A
316 320Right-handed 310
Helix 13
13
A
326 341Right-handed alpha
Helix 14
14
A
412 417Right-handed 310
Helix 15
15
A
431 441Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4I5U. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 98first strand
Strand 2
A
163 169parallel
Strand 3
A
135 137parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 98first strand
Strand 2
A
163 169parallel
Strand 3
A
215 219parallel
Strand 4
A
259 264parallel
Strand 5
A
297 302parallel
Strand 6
A
346 350parallel
Strand 7
A
388 392parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il