Analysis of interatomic Contacts of Structural Units in PDB entry:
4I84


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4I84 entry

There are 2 chains in PDB entry 4I84 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 1GLY 301
B
 ARG 1GLY 301
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 4I84. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
191 194Right-handed 310
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There are 7 sheets in PDB entry 4I84. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 22 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 19first strand
Strand 2
A
22 27anti-parallel
Strand 3
A
46 50parallel
Strand 4
A
73 76parallel
Strand 5
A
95 97parallel
Strand 6
A
142 144parallel
Strand 7
A
161 163parallel
Strand 8
A
205 208parallel
Strand 9
A
231 234parallel
Strand 10
A
258 261parallel
Strand 11
A
284 300parallel
Strand 12
B
284 300anti-parallel
Strand 13
B
258 261parallel
Strand 14
B
231 234parallel
Strand 15
B
205 208parallel
Strand 16
B
161 163parallel
Strand 17
B
142 144parallel
Strand 18
B
95 97parallel
Strand 19
B
73 76parallel
Strand 20
B
46 50parallel
Strand 21
B
22 27parallel
Strand 22
B
14 19anti-parallel
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There are 19 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 11first strand
Strand 2
A
31 38anti-parallel
Strand 3
A
57 62parallel
Strand 4
A
79 83parallel
Strand 5
A
100 104parallel
Strand 6
A
148 152parallel
Strand 7
A
169 174parallel
Strand 8
A
210 215parallel
Strand 9
A
243 247parallel
Strand 10
A
264 268parallel
Strand 11
A
284 300parallel
Strand 12
A
275 279parallel
Strand 13
A
250 253parallel
Strand 14
A
225 228parallel
Strand 15
A
199 202parallel
Strand 16
A
155 158parallel
Strand 17
A
136 139parallel
Strand 18
A
88 90parallel
Strand 19
A
68 70parallel
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There are 19 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 11first strand
Strand 2
B
31 38anti-parallel
Strand 3
B
57 62parallel
Strand 4
B
79 83parallel
Strand 5
B
100 104parallel
Strand 6
B
148 152parallel
Strand 7
B
169 174parallel
Strand 8
B
210 215parallel
Strand 9
B
243 247parallel
Strand 10
B
264 268parallel
Strand 11
B
284 300parallel
Strand 12
B
275 279parallel
Strand 13
B
250 253parallel
Strand 14
B
225 228parallel
Strand 15
B
199 202parallel
Strand 16
B
155 158parallel
Strand 17
B
136 139parallel
Strand 18
B
88 90parallel
Strand 19
B
68 70parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 122first strand
Strand 2
A
176 180anti-parallel
Strand 3
A
185 189anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 237first strand
Strand 2
A
240 241anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 178first strand
Strand 2
B
187 189anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
236 237first strand
Strand 2
B
240 241anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il