Analysis of interatomic Contacts of Structural Units in PDB entry:
4I8I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4I8I entry

There is 1 chain in PDB entry 4I8I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 30LYS 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 4I8I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
39 47Right-handed alpha
Helix 2
2
A
49 56Right-handed alpha
Helix 3
3
A
72 82Right-handed alpha
Helix 4
4
A
105 113Right-handed alpha
Helix 5
5
A
123 127Right-handed 310
Helix 6
6
A
129 146Right-handed alpha
Helix 7
7
A
168 175Right-handed 310
Helix 8
8
A
177 197Right-handed alpha
Helix 9
9
A
204 214Right-handed alpha
Helix 10
10
A
230 246Right-handed alpha
Helix 11
11
A
248 252Right-handed 310
Helix 12
12
A
260 277Right-handed alpha
Helix 13
13
A
284 288Right-handed 310
Back to top of page

There is 1 sheet ( A) in PDB entry 4I8I.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 104first strand
Strand 2
A
87 92anti-parallel
Strand 3
A
60 67anti-parallel
Strand 4
A
31 38parallel
Strand 5
A
117 120parallel
Strand 6
A
153 158parallel
Strand 7
A
200 203parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il