Analysis of interatomic Contacts of Structural Units in PDB entry:
4I96


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4I96 entry

There is 1 chain in PDB entry 4I96 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 217GLY 532
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 4I96. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
250 258Right-handed 310
Helix 2
2
A
303 307Right-handed 310
Helix 3
3
A
308 313Right-handed alpha
Helix 4
4
A
394 421Right-handed alpha
Helix 5
5
A
437 452Right-handed alpha
Helix 6
6
A
465 481Right-handed alpha
Helix 7
7
A
482 495Right-handed alpha
Helix 8
8
A
499 505Right-handed alpha
Helix 9
9
A
508 513Right-handed alpha
Helix 10
10
A
514 531Right-handed alpha
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There are 4 sheets in PDB entry 4I96. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 224first strand
Strand 2
A
260 264anti-parallel
Strand 3
A
280 284anti-parallel
Strand 4
A
314 317anti-parallel
Strand 5
A
345 350anti-parallel
Strand 6
A
388 392anti-parallel
Strand 7
A
219 224anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 232first strand
Strand 2
A
246 248anti-parallel
Strand 3
A
374 375anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 294first strand
Strand 2
A
298 302anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 358first strand
Strand 2
A
377 379anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il