Analysis of interatomic Contacts of Structural Units in PDB entry:
4IA6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4IA6 entry

There are 2 chains in PDB entry 4IA6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 591
B
 MET 1VAL 591
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 4IA6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 12Right-handed alpha
Helix 2
2
A
19 23Right-handed 310
Helix 3
3
A
31 44Right-handed alpha
Helix 4
4
A
48 50Right-handed 310
Helix 5
5
A
87 95Right-handed alpha
Helix 6
6
A
106 118Right-handed alpha
Helix 7
7
A
142 144Right-handed 310
Helix 8
8
A
145 154Right-handed alpha
Helix 9
9
A
156 160Right-handed 310
Helix 10
10
A
164 169Right-handed alpha
Helix 11
11
A
170 175Right-handed alpha
Helix 12
12
A
176 187Right-handed alpha
Helix 13
13
A
193 204Right-handed alpha
Helix 14
14
A
205 211Right-handed 310
Helix 15
15
A
223 239Right-handed alpha
Helix 16
16
A
312 323Right-handed alpha
Helix 17
17
A
331 336Right-handed alpha
Helix 18
18
A
356 365Right-handed alpha
Helix 19
19
A
425 429Right-handed 310
Helix 20
20
A
430 443Right-handed alpha
Helix 21
21
A
445 453Right-handed alpha
Helix 22
22
A
469 473Right-handed 310
Helix 23
23
A
508 525Right-handed alpha
Helix 24
24
A
535 538Right-handed 310
Helix 25
25
A
539 551Right-handed alpha
Helix 26
26
A
555 559Right-handed 310
Helix 27
27
A
562 576Right-handed alpha
Helix 28
28
A
579 588Right-handed alpha
Helix 29
29
B
6 12Right-handed alpha
Helix 30
30
B
19 23Right-handed 310
Helix 31
31
B
31 44Right-handed alpha
Helix 32
32
B
48 50Right-handed 310
Helix 33
33
B
87 95Right-handed alpha
Helix 34
34
B
106 118Right-handed alpha
Helix 35
35
B
142 144Right-handed 310
Helix 36
36
B
145 155Right-handed alpha
Helix 37
37
B
156 160Right-handed 310
Helix 38
38
B
164 169Right-handed alpha
Helix 39
39
B
172 175Right-handed 310
Helix 40
40
B
176 187Right-handed alpha
Helix 41
41
B
193 204Right-handed alpha
Helix 42
42
B
205 211Right-handed 310
Helix 43
43
B
223 228Right-handed alpha
Helix 44
44
B
228 239Right-handed alpha
Helix 45
45
B
312 323Right-handed alpha
Helix 46
46
B
324 330Right-handed 310
Helix 47
47
B
331 336Right-handed alpha
Helix 48
48
B
356 365Right-handed alpha
Helix 49
49
B
425 429Right-handed 310
Helix 50
50
B
430 443Right-handed alpha
Helix 51
51
B
445 453Right-handed alpha
Helix 52
52
B
469 473Right-handed 310
Helix 53
53
B
508 525Right-handed alpha
Helix 54
54
B
535 538Right-handed 310
Helix 55
55
B
539 551Right-handed alpha
Helix 56
56
B
576 588Right-handed alpha
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There are 8 sheets in PDB entry 4IA6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 4first strand
Strand 2
A
530 531parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 244first strand
Strand 2
A
52 55parallel
Strand 3
A
24 28parallel
Strand 4
A
283 288parallel
Strand 5
A
491 494parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
126 128anti-parallel
Strand 3
A
379 381parallel
Strand 4
A
388 391anti-parallel
Strand 5
A
406 412anti-parallel
Strand 6
A
345 351anti-parallel
Strand 7
A
458 464anti-parallel
Strand 8
A
297 298anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 257first strand
Strand 2
A
260 270anti-parallel
Strand 3
A
273 278anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 4first strand
Strand 2
B
530 531parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
242 244first strand
Strand 2
B
52 55parallel
Strand 3
B
24 28parallel
Strand 4
B
283 288parallel
Strand 5
B
491 494parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
B
126 128anti-parallel
Strand 3
B
379 381parallel
Strand 4
B
388 391anti-parallel
Strand 5
B
406 412anti-parallel
Strand 6
B
345 351anti-parallel
Strand 7
B
458 464anti-parallel
Strand 8
B
297 298anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 257first strand
Strand 2
B
260 270anti-parallel
Strand 3
B
273 278anti-parallel
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