Analysis of interatomic Contacts of Structural Units in PDB entry:
4IJI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4IJI entry

There are 7 chains in PDB entry 4IJI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0PRO 203
B
 SER 0PRO 203
C
 LEU 1VAL 204
D
 LEU 1PRO 203
E
 SER 0PRO 203
F
 SER 0VAL 204
G
 SER 0GLN 46
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 87 helices in PDB entry 4IJI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 22Right-handed alpha
Helix 2
2
A
24 26Right-handed 310
Helix 3
3
A
41 48Right-handed alpha
Helix 4
4
A
66 75Right-handed alpha
Helix 5
5
A
87 117Right-handed alpha
Helix 6
6
A
119 123Right-handed 310
Helix 7
7
A
124 146Right-handed alpha
Helix 8
8
A
146 153Right-handed alpha
Helix 9
9
A
155 172Right-handed alpha
Helix 10
10
A
181 192Right-handed alpha
Helix 11
11
A
194 199Right-handed alpha
Helix 12
12
B
9 22Right-handed alpha
Helix 13
13
B
24 26Right-handed 310
Helix 14
14
B
41 46Right-handed alpha
Helix 15
15
B
66 75Right-handed alpha
Helix 16
16
B
89 118Right-handed alpha
Helix 17
17
B
119 123Right-handed 310
Helix 18
18
B
124 146Right-handed alpha
Helix 19
19
B
146 153Right-handed alpha
Helix 20
20
B
155 172Right-handed alpha
Helix 21
21
B
173 176Right-handed 310
Helix 22
22
B
181 192Right-handed alpha
Helix 23
23
B
194 199Right-handed alpha
Helix 24
24
C
9 22Right-handed alpha
Helix 25
25
C
24 28Right-handed 310
Helix 26
26
C
66 75Right-handed alpha
Helix 27
27
C
88 118Right-handed alpha
Helix 28
28
C
119 123Right-handed 310
Helix 29
29
C
124 146Right-handed alpha
Helix 30
30
C
146 153Right-handed alpha
Helix 31
31
C
155 172Right-handed alpha
Helix 32
32
C
173 176Right-handed 310
Helix 33
33
C
181 192Right-handed alpha
Helix 34
34
C
194 199Right-handed alpha
Helix 35
35
D
9 22Right-handed alpha
Helix 36
36
D
24 28Right-handed 310
Helix 37
37
D
41 46Right-handed alpha
Helix 38
38
D
66 76Right-handed alpha
Helix 39
39
D
87 118Right-handed alpha
Helix 40
40
D
119 123Right-handed 310
Helix 41
41
D
124 146Right-handed alpha
Helix 42
42
D
146 153Right-handed alpha
Helix 43
43
D
155 172Right-handed alpha
Helix 44
44
D
181 192Right-handed alpha
Helix 45
45
D
194 199Right-handed alpha
Helix 46
46
E
9 22Right-handed alpha
Helix 47
47
E
24 26Right-handed 310
Helix 48
48
E
66 76Right-handed alpha
Helix 49
49
E
87 118Right-handed alpha
Helix 50
50
E
119 123Right-handed 310
Helix 51
51
E
124 146Right-handed alpha
Helix 52
52
E
146 153Right-handed alpha
Helix 53
53
E
155 172Right-handed alpha
Helix 54
54
E
181 193Right-handed alpha
Helix 55
55
E
194 199Right-handed alpha
Helix 56
56
F
9 22Right-handed alpha
Helix 57
57
F
24 26Right-handed 310
Helix 58
58
F
66 76Right-handed alpha
Helix 59
59
F
88 118Right-handed alpha
Helix 60
60
F
119 123Right-handed 310
Helix 61
61
F
124 146Right-handed alpha
Helix 62
62
F
146 153Right-handed alpha
Helix 63
63
F
155 172Right-handed alpha
Helix 64
64
F
181 192Right-handed alpha
Helix 65
65
F
194 199Right-handed alpha
Helix 66
66
G
9 22Right-handed alpha
Helix 67
67
G
24 26Right-handed 310
Helix 68
68
G
41 48Right-handed alpha
Helix 69
69
G
66 76Right-handed alpha
Helix 70
70
G
88 117Right-handed alpha
Helix 71
71
G
119 123Right-handed 310
Helix 72
72
G
124 147Right-handed alpha
Helix 73
73
G
148 152Right-handed 310
Helix 74
74
G
155 172Right-handed alpha
Helix 75
75
G
181 192Right-handed alpha
Helix 76
76
G
194 199Right-handed alpha
Helix 77
77
H
9 22Right-handed alpha
Helix 78
78
H
24 26Right-handed 310
Helix 79
79
H
66 75Right-handed alpha
Helix 80
80
H
88 118Right-handed alpha
Helix 81
81
H
119 123Right-handed 310
Helix 82
82
H
124 146Right-handed alpha
Helix 83
83
H
146 153Right-handed alpha
Helix 84
84
H
155 172Right-handed alpha
Helix 85
85
H
173 176Right-handed 310
Helix 86
86
H
181 192Right-handed alpha
Helix 87
87
H
194 199Right-handed alpha
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There are 8 sheets in PDB entry 4IJI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
1 5parallel
Strand 3
A
56 57anti-parallel
Strand 4
A
63 64anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 32first strand
Strand 2
B
1 5parallel
Strand 3
B
55 57anti-parallel
Strand 4
B
63 64anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 32first strand
Strand 2
C
2 5parallel
Strand 3
C
55 57anti-parallel
Strand 4
C
63 64anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
29 32first strand
Strand 2
D
2 5parallel
Strand 3
D
56 57anti-parallel
Strand 4
D
63 64anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
28 32first strand
Strand 2
E
1 5parallel
Strand 3
E
55 57anti-parallel
Strand 4
E
63 64anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
28 32first strand
Strand 2
F
1 5parallel
Strand 3
F
55 57anti-parallel
Strand 4
F
63 64anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
28 32first strand
Strand 2
G
1 5parallel
Strand 3
G
55 57anti-parallel
Strand 4
G
63 64anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
28 32first strand
Strand 2
H
1 5parallel
Strand 3
H
55 57anti-parallel
Strand 4
H
63 64anti-parallel
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