Analysis of interatomic Contacts of Structural Units in PDB entry:
4IJJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4IJJ entry

There are 3 chains in PDB entry 4IJJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2HIS 130
B
 MET 1HIS 130
C
 ALA 2HIS 130
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4IJJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 8Right-handed alpha
Helix 2
2
A
16 44Right-handed alpha
Helix 3
3
A
56 91Right-handed alpha
Helix 4
4
A
104 111Right-handed alpha
Helix 5
5
A
117 129Right-handed alpha
Helix 6
6
B
3 8Right-handed alpha
Helix 7
7
B
16 49Right-handed alpha
Helix 8
8
B
53 56Right-handed 310
Helix 9
9
B
57 90Right-handed alpha
Helix 10
10
B
104 111Right-handed alpha
Helix 11
11
B
117 126Right-handed alpha
Helix 12
12
C
3 8Right-handed alpha
Helix 13
13
C
16 49Right-handed alpha
Helix 14
14
C
59 90Right-handed alpha
Helix 15
15
C
104 111Right-handed alpha
Helix 16
16
C
117 126Right-handed alpha
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There are no sheets in PDB entry 4IJJ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il