Analysis of interatomic Contacts of Structural Units in PDB entry:
4IM7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4IM7 entry

There is 1 chain in PDB entry 4IM7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 5LYS 487
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 4IM7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 9Right-handed 310
Helix 2
2
A
17 21Right-handed 310
Helix 3
3
A
31 37Right-handed alpha
Helix 4
4
A
37 49Right-handed alpha
Helix 5
5
A
63 72Right-handed alpha
Helix 6
6
A
105 114Right-handed alpha
Helix 7
7
A
126 131Right-handed 310
Helix 8
8
A
143 152Right-handed alpha
Helix 9
9
A
158 173Right-handed alpha
Helix 10
10
A
188 205Right-handed alpha
Helix 11
11
A
205 216Right-handed alpha
Helix 12
12
A
231 243Right-handed alpha
Helix 13
13
A
270 275Right-handed 310
Helix 14
14
A
282 293Right-handed alpha
Helix 15
15
A
293 307Right-handed alpha
Helix 16
16
A
311 316Right-handed alpha
Helix 17
17
A
318 332Right-handed alpha
Helix 18
18
A
333 337Right-handed 310
Helix 19
19
A
343 356Right-handed alpha
Helix 20
20
A
363 369Right-handed alpha
Helix 21
21
A
370 379Right-handed alpha
Helix 22
22
A
379 389Right-handed alpha
Helix 23
23
A
393 407Right-handed alpha
Helix 24
24
A
423 433Right-handed alpha
Helix 25
25
A
437 446Right-handed alpha
Helix 26
26
A
447 452Right-handed alpha
Helix 27
27
A
454 457Right-handed 310
Helix 28
28
A
458 487Right-handed alpha
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There are 3 sheets in PDB entry 4IM7. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 100first strand
Strand 2
A
53 59parallel
Strand 3
A
22 28parallel
Strand 4
A
120 123parallel
Strand 5
A
179 182parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 92first strand
Strand 2
A
77 82anti-parallel
Strand 3
A
250 252parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 224first strand
Strand 2
A
257 261anti-parallel
Strand 3
A
277 279parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il