Analysis of interatomic Contacts of Structural Units in PDB entry:
4INQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4INQ entry

There is 1 chain in PDB entry 4INQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 625TRP 996
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4INQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
642 650Right-handed alpha
Helix 2
2
A
661 663Right-handed 310
Helix 3
3
A
670 676Right-handed alpha
Helix 4
4
A
677 680Right-handed 310
Helix 5
5
A
681 688Right-handed alpha
Helix 6
6
A
693 704Right-handed alpha
Helix 7
7
A
705 709Right-handed 310
Helix 8
8
A
710 716Right-handed 310
Helix 9
9
A
732 734Right-handed 310
Helix 10
10
A
890 894Right-handed 310
Helix 11
11
A
898 904Right-handed alpha
Helix 12
12
A
919 922Right-handed 310
Helix 13
13
A
923 931Right-handed alpha
Helix 14
14
A
933 954Right-handed alpha
Helix 15
15
A
979 986Right-handed alpha
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There are 4 sheets in PDB entry 4INQ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
665 669first strand
Strand 2
A
717 719parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
726 731first strand
Strand 2
A
736 744anti-parallel
Strand 3
A
749 756anti-parallel
Strand 4
A
759 771anti-parallel
Strand 5
A
776 781anti-parallel
Strand 6
A
802 805anti-parallel
Strand 7
A
813 816anti-parallel
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There are 12 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
726 731first strand
Strand 2
A
736 744anti-parallel
Strand 3
A
749 756anti-parallel
Strand 4
A
759 771anti-parallel
Strand 5
A
784 788anti-parallel
Strand 6
A
794 797anti-parallel
Strand 7
A
819 824anti-parallel
Strand 8
A
829 834anti-parallel
Strand 9
A
846 852anti-parallel
Strand 10
A
862 867anti-parallel
Strand 11
A
871 874anti-parallel
Strand 12
A
879 883anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
963 967first strand
Strand 2
A
970 973anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il