Analysis of interatomic Contacts of Structural Units in PDB entry:
4IU8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4IU8 entry

There are 2 chains in PDB entry 4IU8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 12TYR 454
B
LEU 12TYR 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 4IU8. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
20 26Right-handed alpha
Helix 2
2
A
27 40Right-handed alpha
Helix 3
3
A
40 51Right-handed alpha
Helix 4
4
A
54 60Right-handed alpha
Helix 5
5
A
68 78Right-handed alpha
Helix 6
6
A
78 87Right-handed alpha
Helix 7
7
A
90 92Right-handed 310
Helix 8
8
A
93 98Right-handed alpha
Helix 9
9
A
98 109Right-handed alpha
Helix 10
10
A
110 121Right-handed alpha
Helix 11
11
A
127 144Right-handed alpha
Helix 12
12
A
145 153Right-handed alpha
Helix 13
13
A
154 156Right-handed 310
Helix 14
14
A
160 173Right-handed alpha
Helix 15
15
A
173 187Right-handed alpha
Helix 16
16
A
192 196Right-handed 310
Helix 17
17
A
211 216Right-handed alpha
Helix 18
18
A
216 230Right-handed alpha
Helix 19
19
A
256 274Right-handed alpha
Helix 20
20
A
275 283Right-handed alpha
Helix 21
21
A
287 292Right-handed 310
Helix 22
22
A
293 305Right-handed alpha
Helix 23
23
A
307 312Right-handed alpha
Helix 24
24
A
315 333Right-handed alpha
Helix 25
25
A
334 336Right-handed 310
Helix 26
26
A
344 386Right-handed alpha
Helix 27
27
A
396 412Right-handed alpha
Helix 28
28
A
413 429Right-handed alpha
Helix 29
29
A
435 453Right-handed alpha
Helix 30
30
B
20 27Right-handed alpha
Helix 31
31
B
28 52Right-handed alpha
Helix 32
32
B
52 61Right-handed alpha
Helix 33
33
B
68 78Right-handed alpha
Helix 34
34
B
78 93Right-handed alpha
Helix 35
35
B
93 98Right-handed alpha
Helix 36
36
B
100 109Right-handed alpha
Helix 37
37
B
110 122Right-handed alpha
Helix 38
38
B
127 141Right-handed alpha
Helix 39
39
B
143 152Right-handed alpha
Helix 40
40
B
153 155Right-handed 310
Helix 41
41
B
157 159Right-handed 310
Helix 42
42
B
160 173Right-handed alpha
Helix 43
43
B
174 183Right-handed alpha
Helix 44
44
B
192 196Right-handed 310
Helix 45
45
B
202 206Right-handed 310
Helix 46
46
B
211 216Right-handed alpha
Helix 47
47
B
216 230Right-handed alpha
Helix 48
48
B
244 249Right-handed alpha
Helix 49
49
B
253 263Right-handed alpha
Helix 50
50
B
264 283Right-handed alpha
Helix 51
51
B
287 291Right-handed 310
Helix 52
52
B
293 314Right-handed alpha
Helix 53
53
B
314 333Right-handed alpha
Helix 54
54
B
344 378Right-handed alpha
Helix 55
55
B
394 413Right-handed alpha
Helix 56
56
B
413 428Right-handed alpha
Helix 57
57
B
432 453Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4IU8.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
200 201first strand
Strand 2
A
207 208anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il