Analysis of interatomic Contacts of Structural Units in PDB entry:
4J1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4J1V entry

There are 6 chains in PDB entry 4J1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 41GLY 212
C
 LEU 41GLY 212
E
 ALA 308ASP 316
G
 LEU 309GLU 323
F
 ALA 308ASP 316
H
 LEU 309GLU 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4J1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 76Right-handed alpha
Helix 2
2
A
77 79Right-handed 310
Helix 3
3
A
110 127Right-handed alpha
Helix 4
4
A
143 166Right-handed alpha
Helix 5
5
A
166 173Right-handed alpha
Helix 6
6
A
175 194Right-handed alpha
Helix 7
7
A
197 202Right-handed alpha
Helix 8
8
A
204 212Right-handed alpha
Helix 9
9
C
52 76Right-handed alpha
Helix 10
10
C
77 79Right-handed 310
Helix 11
11
C
110 127Right-handed alpha
Helix 12
12
C
143 166Right-handed alpha
Helix 13
13
C
166 173Right-handed alpha
Helix 14
14
C
175 194Right-handed alpha
Helix 15
15
C
197 202Right-handed alpha
Helix 16
16
C
204 212Right-handed alpha
Helix 17
17
G
310 314Right-handed 310
Helix 18
18
H
310 314Right-handed 310
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There are no sheets in PDB entry 4J1V
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il