Analysis of interatomic Contacts of Structural Units in PDB entry:
4J2H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4J2H entry

There is 1 chain in PDB entry 4J2H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4ILE 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4J2H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 33Right-handed alpha
Helix 2
2
A
44 46Right-handed 310
Helix 3
3
A
47 56Right-handed alpha
Helix 4
4
A
70 86Right-handed alpha
Helix 5
5
A
102 106Right-handed 310
Helix 6
6
A
107 119Right-handed alpha
Helix 7
7
A
119 136Right-handed alpha
Helix 8
8
A
146 150Right-handed 310
Helix 9
9
A
156 178Right-handed alpha
Helix 10
10
A
192 196Right-handed 310
Helix 11
11
A
198 202Right-handed 310
Helix 12
12
A
203 212Right-handed alpha
Helix 13
13
A
221 224Right-handed 310
Helix 14
14
A
225 234Right-handed alpha
Helix 15
15
A
235 238Right-handed 310
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There is 1 sheet ( A) in PDB entry 4J2H.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 65first strand
Strand 2
A
36 41parallel
Strand 3
A
12 15parallel
Strand 4
A
90 93parallel
Strand 5
A
139 144parallel
Strand 6
A
182 189parallel
Strand 7
A
244 247parallel
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