Analysis of interatomic Contacts of Structural Units in PDB entry:
4J2P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4J2P entry

There is 1 chain in PDB entry 4J2P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 4J2P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 38Right-handed alpha
Helix 2
2
A
50 55Right-handed alpha
Helix 3
3
A
78 88Right-handed alpha
Helix 4
4
A
99 117Right-handed alpha
Helix 5
5
A
137 156Right-handed alpha
Helix 6
6
A
158 160Right-handed 310
Helix 7
7
A
161 168Right-handed alpha
Helix 8
8
A
173 188Right-handed alpha
Helix 9
9
A
203 225Right-handed alpha
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There are 2 sheets in PDB entry 4J2P. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 48first strand
Strand 2
A
6 11parallel
Strand 3
A
192 197parallel
Strand 4
A
126 134parallel
Strand 5
A
92 94parallel
Strand 6
A
71 75parallel
Strand 7
A
65 68anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 48first strand
Strand 2
A
6 11parallel
Strand 3
A
192 197parallel
Strand 4
A
126 134parallel
Strand 5
A
170 172parallel
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