Analysis of interatomic Contacts of Structural Units in PDB entry:
4J4R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4J4R entry

There is 1 chain in PDB entry 4J4R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1LEU 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4J4R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 15Right-handed alpha
Helix 2
2
A
20 32Right-handed alpha
Helix 3
3
A
37 50Right-handed alpha
Helix 4
4
A
52 68Right-handed alpha
Helix 5
5
A
70 77Right-handed alpha
Helix 6
6
A
79 94Right-handed alpha
Helix 7
7
A
106 114Right-handed alpha
Helix 8
8
A
114 125Right-handed alpha
Helix 9
9
A
126 129Right-handed 310
Helix 10
10
A
132 140Right-handed alpha
Helix 11
11
A
144 148Right-handed 310
Helix 12
12
A
151 156Right-handed 310
Helix 13
13
A
162 185Right-handed alpha
Helix 14
14
A
186 189Right-handed 310
Helix 15
15
A
192 210Right-handed alpha
Helix 16
16
A
214 225Right-handed alpha
Helix 17
17
A
235 248Right-handed alpha
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There are no sheets in PDB entry 4J4R
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il