Analysis of interatomic Contacts of Structural Units in PDB entry:
4J4W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4J4W entry

There is 1 chain in PDB entry 4J4W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 4J4W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 11Right-handed alpha
Helix 2
2
A
16 28Right-handed alpha
Helix 3
3
A
33 46Right-handed alpha
Helix 4
4
A
48 64Right-handed alpha
Helix 5
5
A
66 71Right-handed alpha
Helix 6
6
A
72 74Right-handed 310
Helix 7
7
A
75 90Right-handed alpha
Helix 8
8
A
102 110Right-handed alpha
Helix 9
9
A
110 121Right-handed alpha
Helix 10
10
A
122 125Right-handed 310
Helix 11
11
A
128 136Right-handed alpha
Helix 12
12
A
140 144Right-handed 310
Helix 13
13
A
145 152Right-handed 310
Helix 14
14
A
157 180Right-handed alpha
Helix 15
15
A
181 184Right-handed 310
Helix 16
16
A
187 194Right-handed alpha
Helix 17
17
A
195 204Right-handed alpha
Helix 18
18
A
209 220Right-handed alpha
Helix 19
19
A
230 242Right-handed alpha
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There are no sheets in PDB entry 4J4W
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il