Analysis of interatomic Contacts of Structural Units in PDB entry:
4J4Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4J4Y entry

There are 4 chains in PDB entry 4J4Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4LYS 253
B
 GLU 3LYS 250
C
 GLU 3LYS 253
D
 GLU 3LYS 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 4J4Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 16Right-handed 310
Helix 2
2
A
19 31Right-handed alpha
Helix 3
3
A
36 51Right-handed alpha
Helix 4
4
A
54 70Right-handed alpha
Helix 5
5
A
76 80Right-handed 310
Helix 6
6
A
81 96Right-handed alpha
Helix 7
7
A
108 116Right-handed alpha
Helix 8
8
A
116 127Right-handed alpha
Helix 9
9
A
128 131Right-handed 310
Helix 10
10
A
134 143Right-handed alpha
Helix 11
11
A
147 151Right-handed 310
Helix 12
12
A
152 159Right-handed 310
Helix 13
13
A
166 187Right-handed alpha
Helix 14
14
A
188 191Right-handed 310
Helix 15
15
A
194 200Right-handed alpha
Helix 16
16
A
202 212Right-handed alpha
Helix 17
17
A
216 227Right-handed alpha
Helix 18
18
A
237 251Right-handed alpha
Helix 19
19
B
5 12Right-handed alpha
Helix 20
20
B
13 16Right-handed 310
Helix 21
21
B
19 31Right-handed alpha
Helix 22
22
B
36 51Right-handed alpha
Helix 23
23
B
54 70Right-handed alpha
Helix 24
24
B
72 79Right-handed alpha
Helix 25
25
B
81 96Right-handed alpha
Helix 26
26
B
108 116Right-handed alpha
Helix 27
27
B
116 127Right-handed alpha
Helix 28
28
B
128 131Right-handed 310
Helix 29
29
B
134 142Right-handed alpha
Helix 30
30
B
147 151Right-handed 310
Helix 31
31
B
152 159Right-handed 310
Helix 32
32
B
163 165Right-handed 310
Helix 33
33
B
166 187Right-handed alpha
Helix 34
34
B
189 193Right-handed 310
Helix 35
35
B
194 200Right-handed alpha
Helix 36
36
B
202 211Right-handed alpha
Helix 37
37
B
216 227Right-handed alpha
Helix 38
38
B
238 246Right-handed alpha
Helix 39
39
C
7 12Right-handed alpha
Helix 40
40
C
13 16Right-handed 310
Helix 41
41
C
19 31Right-handed alpha
Helix 42
42
C
36 51Right-handed alpha
Helix 43
43
C
54 70Right-handed alpha
Helix 44
44
C
73 77Right-handed 310
Helix 45
45
C
81 96Right-handed alpha
Helix 46
46
C
108 116Right-handed alpha
Helix 47
47
C
116 124Right-handed alpha
Helix 48
48
C
125 131Right-handed 310
Helix 49
49
C
134 142Right-handed alpha
Helix 50
50
C
147 151Right-handed 310
Helix 51
51
C
152 159Right-handed 310
Helix 52
52
C
163 165Right-handed 310
Helix 53
53
C
166 185Right-handed alpha
Helix 54
54
C
187 191Right-handed 310
Helix 55
55
C
194 211Right-handed alpha
Helix 56
56
C
216 227Right-handed alpha
Helix 57
57
C
237 252Right-handed alpha
Helix 58
58
D
5 12Right-handed alpha
Helix 59
59
D
13 16Right-handed 310
Helix 60
60
D
19 31Right-handed alpha
Helix 61
61
D
36 51Right-handed alpha
Helix 62
62
D
54 70Right-handed alpha
Helix 63
63
D
72 79Right-handed alpha
Helix 64
64
D
81 96Right-handed alpha
Helix 65
65
D
108 116Right-handed alpha
Helix 66
66
D
116 128Right-handed alpha
Helix 67
67
D
129 131Right-handed 310
Helix 68
68
D
134 142Right-handed alpha
Helix 69
69
D
147 151Right-handed 310
Helix 70
70
D
152 159Right-handed 310
Helix 71
71
D
163 165Right-handed 310
Helix 72
72
D
166 187Right-handed alpha
Helix 73
73
D
193 195Right-handed 310
Helix 74
74
D
196 201Right-handed alpha
Helix 75
75
D
202 211Right-handed alpha
Helix 76
76
D
216 227Right-handed alpha
Helix 77
77
D
237 242Right-handed alpha
Helix 78
78
D
244 249Right-handed alpha
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There are no sheets in PDB entry 4J4Y
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