Analysis of interatomic Contacts of Structural Units in PDB entry:
4J75


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4J75 entry

There are 2 chains in PDB entry 4J75 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 244MET 632
B
 GLY 244MET 632
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 4J75. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
246 255Right-handed alpha
Helix 2
2
A
260 272Right-handed alpha
Helix 3
3
A
276 281Right-handed alpha
Helix 4
4
A
289 301Right-handed alpha
Helix 5
5
A
317 335Right-handed alpha
Helix 6
6
A
343 351Right-handed alpha
Helix 7
7
A
355 372Right-handed alpha
Helix 8
8
A
376 378Right-handed 310
Helix 9
9
A
385 402Right-handed alpha
Helix 10
10
A
404 413Right-handed alpha
Helix 11
11
A
419 431Right-handed alpha
Helix 12
12
A
432 438Right-handed 310
Helix 13
13
A
456 470Right-handed alpha
Helix 14
14
A
511 516Right-handed 310
Helix 15
15
A
522 534Right-handed alpha
Helix 16
16
A
541 549Right-handed alpha
Helix 17
17
A
555 565Right-handed alpha
Helix 18
18
A
567 580Right-handed alpha
Helix 19
19
A
584 610Right-handed alpha
Helix 20
20
A
611 619Right-handed alpha
Helix 21
21
A
625 630Right-handed 310
Helix 22
22
B
246 255Right-handed alpha
Helix 23
23
B
260 272Right-handed alpha
Helix 24
24
B
276 281Right-handed alpha
Helix 25
25
B
289 301Right-handed alpha
Helix 26
26
B
317 335Right-handed alpha
Helix 27
27
B
343 351Right-handed alpha
Helix 28
28
B
355 372Right-handed alpha
Helix 29
29
B
376 378Right-handed 310
Helix 30
30
B
385 402Right-handed alpha
Helix 31
31
B
404 413Right-handed alpha
Helix 32
32
B
419 431Right-handed alpha
Helix 33
33
B
432 438Right-handed 310
Helix 34
34
B
456 470Right-handed alpha
Helix 35
35
B
512 516Right-handed 310
Helix 36
36
B
522 534Right-handed alpha
Helix 37
37
B
541 549Right-handed alpha
Helix 38
38
B
555 565Right-handed alpha
Helix 39
39
B
567 578Right-handed alpha
Helix 40
40
B
585 610Right-handed alpha
Helix 41
41
B
611 619Right-handed alpha
Helix 42
42
B
625 630Right-handed 310
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There are 2 sheets in PDB entry 4J75. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
284 288anti-parallel
Strand 3
A
476 480anti-parallel
Strand 4
A
448 453parallel
Strand 5
A
304 309parallel
Strand 6
A
338 342parallel
Strand 7
A
380 384parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 258first strand
Strand 2
B
284 288anti-parallel
Strand 3
B
476 480anti-parallel
Strand 4
B
448 453parallel
Strand 5
B
304 309parallel
Strand 6
B
338 342parallel
Strand 7
B
380 384parallel
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