Analysis of interatomic Contacts of Structural Units in PDB entry:
4J7B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4J7B entry

There are 6 chains in PDB entry 4J7B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 18PHE 311
B
 THR 363LYS 585
C
 LEU 276ALA 324
D
 SER 20PHE 311
E
 THR 363LYS 585
F
 LEU 276ALA 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 4J7B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
73 75Right-handed 310
Helix 2
2
A
77 93Right-handed alpha
Helix 3
3
A
123 132Right-handed alpha
Helix 4
4
A
135 156Right-handed alpha
Helix 5
5
A
164 166Right-handed 310
Helix 6
6
A
205 210Right-handed alpha
Helix 7
7
A
216 233Right-handed alpha
Helix 8
8
A
241 252Right-handed alpha
Helix 9
9
A
261 272Right-handed alpha
Helix 10
10
A
275 279Right-handed 310
Helix 11
11
A
281 287Right-handed 310
Helix 12
12
A
288 293Right-handed alpha
Helix 13
13
A
301 306Right-handed 310
Helix 14
14
B
364 378Right-handed alpha
Helix 15
15
B
387 392Right-handed 310
Helix 16
16
B
393 397Right-handed 310
Helix 17
17
B
460 462Right-handed 310
Helix 18
18
B
463 478Right-handed alpha
Helix 19
19
B
493 497Right-handed 310
Helix 20
20
B
555 562Right-handed alpha
Helix 21
21
B
564 585Right-handed alpha
Helix 22
22
C
300 310Right-handed alpha
Helix 23
23
D
77 93Right-handed alpha
Helix 24
24
D
123 132Right-handed alpha
Helix 25
25
D
135 156Right-handed alpha
Helix 26
26
D
164 166Right-handed 310
Helix 27
27
D
205 210Right-handed alpha
Helix 28
28
D
216 233Right-handed alpha
Helix 29
29
D
241 251Right-handed alpha
Helix 30
30
D
261 272Right-handed alpha
Helix 31
31
D
288 293Right-handed alpha
Helix 32
32
D
301 306Right-handed 310
Helix 33
33
E
364 378Right-handed alpha
Helix 34
34
E
379 383Right-handed 310
Helix 35
35
E
387 392Right-handed 310
Helix 36
36
E
393 397Right-handed 310
Helix 37
37
E
460 462Right-handed 310
Helix 38
38
E
463 478Right-handed alpha
Helix 39
39
E
493 497Right-handed 310
Helix 40
40
E
555 562Right-handed alpha
Helix 41
41
E
564 584Right-handed alpha
Helix 42
42
F
300 310Right-handed alpha
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There are 10 sheets in PDB entry 4J7B. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
37 48anti-parallel
Strand 3
A
51 58anti-parallel
Strand 4
A
64 71anti-parallel
Strand 5
A
111 116anti-parallel
Strand 6
A
102 107anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
185 186anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 170first strand
Strand 2
A
176 178anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
451 455first strand
Strand 2
B
441 445anti-parallel
Strand 3
B
432 435anti-parallel
Strand 4
B
423 427anti-parallel
Strand 5
B
413 418anti-parallel
Strand 6
B
402 407anti-parallel
Strand 7
C
313 314anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
550 554first strand
Strand 2
B
540 544anti-parallel
Strand 3
B
530 535anti-parallel
Strand 4
B
521 525anti-parallel
Strand 5
B
511 516anti-parallel
Strand 6
B
502 507anti-parallel
Strand 7
C
281 282anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
29 31first strand
Strand 2
D
38 48anti-parallel
Strand 3
D
51 58anti-parallel
Strand 4
D
64 71anti-parallel
Strand 5
D
111 116anti-parallel
Strand 6
D
102 107anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
158 159first strand
Strand 2
D
185 186anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
168 170first strand
Strand 2
D
176 178anti-parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
451 455first strand
Strand 2
E
441 445anti-parallel
Strand 3
E
432 435anti-parallel
Strand 4
E
423 427anti-parallel
Strand 5
E
413 418anti-parallel
Strand 6
E
402 407anti-parallel
Strand 7
F
313 315anti-parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
550 554first strand
Strand 2
E
540 544anti-parallel
Strand 3
E
530 535anti-parallel
Strand 4
E
521 525anti-parallel
Strand 5
E
511 516anti-parallel
Strand 6
E
502 507anti-parallel
Strand 7
F
281 282anti-parallel
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