Analysis of interatomic Contacts of Structural Units in PDB entry:
4J7C

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4J7C entry

There are 12 chains in PDB entry 4J7C (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 7	MET 222
B	ASN 6	MET 222
C	LYS 7	MET 222
D	ASN 6	MET 222
E	LYS 7	MET 222
F	ASN 6	MET 222
G	LYS 7	MET 222
H	ASN 6	MET 222
I	THR 15	GLY 445
J	THR 15	GLY 445
K	THR 15	GLY 445
L	THR 15	GLY 445

There are160 helices in PDB entry 4J7C. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	17	28	Right-handed alpha
Helix 2	2	A	38	46	Right-handed alpha
Helix 3	3	A	59	66	Right-handed alpha
Helix 4	4	A	67	71	Right-handed 310
Helix 5	5	A	81	95	Right-handed alpha
Helix 6	6	A	106	116	Right-handed alpha
Helix 7	7	A	123	138	Right-handed alpha
Helix 8	8	A	159	163	Right-handed 310
Helix 9	9	A	172	177	Right-handed alpha
Helix 10	10	A	211	222	Right-handed alpha
Helix 11	11	B	17	28	Right-handed alpha
Helix 12	12	B	38	46	Right-handed alpha
Helix 13	13	B	59	66	Right-handed alpha
Helix 14	14	B	67	71	Right-handed 310
Helix 15	15	B	81	95	Right-handed alpha
Helix 16	16	B	106	116	Right-handed alpha
Helix 17	17	B	123	138	Right-handed alpha
Helix 18	18	B	159	163	Right-handed 310
Helix 19	19	B	211	222	Right-handed alpha
Helix 20	20	C	17	28	Right-handed alpha
Helix 21	21	C	38	46	Right-handed alpha
Helix 22	22	C	59	66	Right-handed alpha
Helix 23	23	C	67	71	Right-handed 310
Helix 24	24	C	81	95	Right-handed alpha
Helix 25	25	C	106	116	Right-handed alpha
Helix 26	26	C	123	138	Right-handed alpha
Helix 27	27	C	159	163	Right-handed 310
Helix 28	28	C	211	222	Right-handed alpha
Helix 29	29	D	17	28	Right-handed alpha
Helix 30	30	D	38	46	Right-handed alpha
Helix 31	31	D	59	66	Right-handed alpha
Helix 32	32	D	67	71	Right-handed 310
Helix 33	33	D	81	95	Right-handed alpha
Helix 34	34	D	106	116	Right-handed alpha
Helix 35	35	D	123	138	Right-handed alpha
Helix 36	36	D	159	163	Right-handed 310
Helix 37	37	D	211	222	Right-handed alpha
Helix 38	38	E	17	28	Right-handed alpha
Helix 39	39	E	38	46	Right-handed alpha
Helix 40	40	E	47	49	Right-handed 310
Helix 41	41	E	59	66	Right-handed alpha
Helix 42	42	E	67	71	Right-handed 310
Helix 43	43	E	81	95	Right-handed alpha
Helix 44	44	E	106	116	Right-handed alpha
Helix 45	45	E	123	138	Right-handed alpha
Helix 46	46	E	159	163	Right-handed 310
Helix 47	47	E	211	222	Right-handed alpha
Helix 48	48	F	15	28	Right-handed alpha
Helix 49	49	F	38	46	Right-handed alpha
Helix 50	50	F	59	66	Right-handed alpha
Helix 51	51	F	67	71	Right-handed 310
Helix 52	52	F	81	95	Right-handed alpha
Helix 53	53	F	106	116	Right-handed alpha
Helix 54	54	F	123	138	Right-handed alpha
Helix 55	55	F	159	163	Right-handed 310
Helix 56	56	F	211	222	Right-handed alpha
Helix 57	57	G	17	28	Right-handed alpha
Helix 58	58	G	38	46	Right-handed alpha
Helix 59	59	G	59	66	Right-handed alpha
Helix 60	60	G	67	71	Right-handed 310
Helix 61	61	G	81	95	Right-handed alpha
Helix 62	62	G	106	116	Right-handed alpha
Helix 63	63	G	123	138	Right-handed alpha
Helix 64	64	G	159	163	Right-handed 310
Helix 65	65	G	211	222	Right-handed alpha
Helix 66	66	H	17	28	Right-handed alpha
Helix 67	67	H	38	46	Right-handed alpha
Helix 68	68	H	59	66	Right-handed alpha
Helix 69	69	H	67	71	Right-handed 310
Helix 70	70	H	81	95	Right-handed alpha
Helix 71	71	H	106	116	Right-handed alpha
Helix 72	72	H	123	138	Right-handed alpha
Helix 73	73	H	159	163	Right-handed 310
Helix 74	74	H	211	222	Right-handed alpha
Helix 75	75	I	16	37	Right-handed alpha
Helix 76	76	I	38	41	Right-handed 310
Helix 77	77	I	46	59	Right-handed alpha
Helix 78	78	I	67	72	Right-handed alpha
Helix 79	79	I	73	90	Right-handed alpha
Helix 80	80	I	90	102	Right-handed alpha
Helix 81	81	I	107	118	Right-handed alpha
Helix 82	82	I	125	146	Right-handed alpha
Helix 83	83	I	147	152	Right-handed alpha
Helix 84	84	I	160	174	Right-handed alpha
Helix 85	85	I	185	189	Right-handed 310
Helix 86	86	I	191	207	Right-handed alpha
Helix 87	87	I	208	219	Right-handed alpha
Helix 88	88	I	225	251	Right-handed alpha
Helix 89	89	I	263	275	Right-handed alpha
Helix 90	90	I	290	303	Right-handed alpha
Helix 91	91	I	315	331	Right-handed alpha
Helix 92	92	I	344	373	Right-handed alpha
Helix 93	93	I	376	389	Right-handed alpha
Helix 94	94	I	397	401	Right-handed 310
Helix 95	95	I	402	419	Right-handed alpha
Helix 96	96	I	419	425	Right-handed alpha
Helix 97	97	J	16	37	Right-handed alpha
Helix 98	98	J	38	41	Right-handed 310
Helix 99	99	J	46	59	Right-handed alpha
Helix 100	100	J	67	72	Right-handed alpha
Helix 101	101	J	73	90	Right-handed alpha
Helix 102	102	J	90	102	Right-handed alpha
Helix 103	103	J	107	118	Right-handed alpha
Helix 104	104	J	125	146	Right-handed alpha
Helix 105	105	J	147	152	Right-handed alpha
Helix 106	106	J	160	174	Right-handed alpha
Helix 107	107	J	191	207	Right-handed alpha
Helix 108	108	J	208	219	Right-handed alpha
Helix 109	109	J	225	251	Right-handed alpha
Helix 110	110	J	263	275	Right-handed alpha
Helix 111	111	J	290	303	Right-handed alpha
Helix 112	112	J	315	331	Right-handed alpha
Helix 113	113	J	344	373	Right-handed alpha
Helix 114	114	J	376	389	Right-handed alpha
Helix 115	115	J	397	401	Right-handed 310
Helix 116	116	J	402	419	Right-handed alpha
Helix 117	117	J	419	428	Right-handed alpha
Helix 118	118	K	16	37	Right-handed alpha
Helix 119	119	K	38	41	Right-handed 310
Helix 120	120	K	46	59	Right-handed alpha
Helix 121	121	K	67	72	Right-handed alpha
Helix 122	122	K	73	90	Right-handed alpha
Helix 123	123	K	90	102	Right-handed alpha
Helix 124	124	K	107	118	Right-handed alpha
Helix 125	125	K	125	152	Right-handed alpha
Helix 126	126	K	160	174	Right-handed alpha
Helix 127	127	K	185	189	Right-handed 310
Helix 128	128	K	191	207	Right-handed alpha
Helix 129	129	K	208	219	Right-handed alpha
Helix 130	130	K	225	251	Right-handed alpha
Helix 131	131	K	263	275	Right-handed alpha
Helix 132	132	K	285	289	Right-handed 310
Helix 133	133	K	290	303	Right-handed alpha
Helix 134	134	K	315	331	Right-handed alpha
Helix 135	135	K	344	373	Right-handed alpha
Helix 136	136	K	376	389	Right-handed alpha
Helix 137	137	K	397	401	Right-handed 310
Helix 138	138	K	402	419	Right-handed alpha
Helix 139	139	K	419	428	Right-handed alpha
Helix 140	140	L	16	37	Right-handed alpha
Helix 141	141	L	38	41	Right-handed 310
Helix 142	142	L	46	59	Right-handed alpha
Helix 143	143	L	67	72	Right-handed alpha
Helix 144	144	L	73	90	Right-handed alpha
Helix 145	145	L	90	102	Right-handed alpha
Helix 146	146	L	107	118	Right-handed alpha
Helix 147	147	L	125	152	Right-handed alpha
Helix 148	148	L	160	174	Right-handed alpha
Helix 149	149	L	185	189	Right-handed 310
Helix 150	150	L	191	207	Right-handed alpha
Helix 151	151	L	208	219	Right-handed alpha
Helix 152	152	L	225	251	Right-handed alpha
Helix 153	153	L	263	275	Right-handed alpha
Helix 154	154	L	285	289	Right-handed 310
Helix 155	155	L	290	303	Right-handed alpha
Helix 156	156	L	315	331	Right-handed alpha
Helix 157	157	L	344	373	Right-handed alpha
Helix 158	158	L	376	389	Right-handed alpha
Helix 159	159	L	402	419	Right-handed alpha
Helix 160	160	L	419	428	Right-handed alpha

There are 24 sheets in PDB entry 4J7C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	54	first strand
Strand 2	A	31	36	parallel
Strand 3	A	8	12	parallel
Strand 4	A	73	76	parallel
Strand 5	A	99	103	parallel
Strand 6	A	120	122	parallel

Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	146	first strand
Strand 2	A	151	157	anti-parallel
Strand 3	A	204	210	anti-parallel
Strand 4	A	179	185	anti-parallel
Strand 5	A	188	191	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	165	166	first strand
Strand 2	A	198	199	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	54	first strand
Strand 2	B	31	36	parallel
Strand 3	B	8	12	parallel
Strand 4	B	73	76	parallel
Strand 5	B	99	103	parallel
Strand 6	B	120	122	parallel

Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	146	first strand
Strand 2	B	151	157	anti-parallel
Strand 3	B	204	210	anti-parallel
Strand 4	B	179	185	anti-parallel
Strand 5	B	188	191	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	54	first strand
Strand 2	C	31	36	parallel
Strand 3	C	8	12	parallel
Strand 4	C	73	76	parallel
Strand 5	C	99	103	parallel
Strand 6	C	120	122	parallel

Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	146	first strand
Strand 2	C	151	157	anti-parallel
Strand 3	C	204	210	anti-parallel
Strand 4	C	179	185	anti-parallel
Strand 5	C	188	191	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	165	166	first strand
Strand 2	C	198	199	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	54	first strand
Strand 2	D	31	36	parallel
Strand 3	D	8	12	parallel
Strand 4	D	73	76	parallel
Strand 5	D	99	103	parallel
Strand 6	D	120	122	parallel

Back to list of sheets
Back to top of page

There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	146	first strand
Strand 2	D	151	157	anti-parallel
Strand 3	D	204	210	anti-parallel
Strand 4	D	179	185	anti-parallel
Strand 5	D	188	191	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	51	54	first strand
Strand 2	E	31	36	parallel
Strand 3	E	8	12	parallel
Strand 4	E	73	76	parallel
Strand 5	E	99	103	parallel
Strand 6	E	120	122	parallel

Back to list of sheets
Back to top of page

There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	141	146	first strand
Strand 2	E	151	157	anti-parallel
Strand 3	E	204	210	anti-parallel
Strand 4	E	179	185	anti-parallel
Strand 5	E	188	191	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	165	166	first strand
Strand 2	E	198	199	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	51	54	first strand
Strand 2	F	31	36	parallel
Strand 3	F	8	12	parallel
Strand 4	F	73	76	parallel
Strand 5	F	99	103	parallel
Strand 6	F	120	122	parallel

Back to list of sheets
Back to top of page

There are 5 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	141	146	first strand
Strand 2	F	151	157	anti-parallel
Strand 3	F	204	210	anti-parallel
Strand 4	F	179	185	anti-parallel
Strand 5	F	188	191	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	51	54	first strand
Strand 2	G	31	36	parallel
Strand 3	G	8	12	parallel
Strand 4	G	73	76	parallel
Strand 5	G	99	103	parallel
Strand 6	G	120	122	parallel

Back to list of sheets
Back to top of page

There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	141	146	first strand
Strand 2	G	151	157	anti-parallel
Strand 3	G	204	210	anti-parallel
Strand 4	G	179	185	anti-parallel
Strand 5	G	188	191	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	165	166	first strand
Strand 2	G	198	199	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	51	54	first strand
Strand 2	H	31	36	parallel
Strand 3	H	8	12	parallel
Strand 4	H	73	76	parallel
Strand 5	H	99	103	parallel
Strand 6	H	120	122	parallel

Back to list of sheets
Back to top of page

There are 5 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	141	146	first strand
Strand 2	H	151	157	anti-parallel
Strand 3	H	204	210	anti-parallel
Strand 4	H	179	185	anti-parallel
Strand 5	H	188	191	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	337	338	first strand
Strand 2	I	341	342	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	337	338	first strand
Strand 2	J	341	342	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	337	338	first strand
Strand 2	K	341	342	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	337	338	first strand
Strand 2	L	341	342	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4J7C

Analysis of interatomic Contacts of Structural Units in PDB entry:
4J7C