Analysis of interatomic Contacts of Structural Units in PDB entry:
4JA3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JA3 entry

There are 2 chains in PDB entry 4JA3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 8GLU 465
B
 SER 7LEU 471
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 4JA3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 30Right-handed alpha
Helix 2
2
A
31 33Right-handed 310
Helix 3
3
A
34 43Right-handed alpha
Helix 4
4
A
49 63Right-handed alpha
Helix 5
5
A
63 82Right-handed alpha
Helix 6
6
A
83 104Right-handed alpha
Helix 7
7
A
120 124Right-handed 310
Helix 8
8
A
125 153Right-handed alpha
Helix 9
9
A
156 158Right-handed 310
Helix 10
10
A
159 187Right-handed alpha
Helix 11
11
A
197 205Right-handed alpha
Helix 12
12
A
206 217Right-handed alpha
Helix 13
13
A
218 220Right-handed 310
Helix 14
14
A
223 230Right-handed alpha
Helix 15
15
A
232 264Right-handed alpha
Helix 16
16
A
277 291Right-handed alpha
Helix 17
17
A
292 300Right-handed alpha
Helix 18
18
A
311 339Right-handed alpha
Helix 19
19
A
341 365Right-handed alpha
Helix 20
20
A
368 386Right-handed alpha
Helix 21
21
A
386 397Right-handed alpha
Helix 22
22
A
408 431Right-handed alpha
Helix 23
23
A
442 463Right-handed alpha
Helix 24
24
B
8 30Right-handed alpha
Helix 25
25
B
31 33Right-handed 310
Helix 26
26
B
34 43Right-handed alpha
Helix 27
27
B
49 63Right-handed alpha
Helix 28
28
B
63 74Right-handed alpha
Helix 29
29
B
74 82Right-handed alpha
Helix 30
30
B
83 104Right-handed alpha
Helix 31
31
B
120 124Right-handed 310
Helix 32
32
B
125 153Right-handed alpha
Helix 33
33
B
156 158Right-handed 310
Helix 34
34
B
159 187Right-handed alpha
Helix 35
35
B
197 205Right-handed alpha
Helix 36
36
B
206 217Right-handed alpha
Helix 37
37
B
218 220Right-handed 310
Helix 38
38
B
223 230Right-handed alpha
Helix 39
39
B
232 245Right-handed alpha
Helix 40
40
B
246 251Right-handed alpha
Helix 41
41
B
253 258Right-handed alpha
Helix 42
42
B
277 291Right-handed alpha
Helix 43
43
B
292 300Right-handed alpha
Helix 44
44
B
311 339Right-handed alpha
Helix 45
45
B
341 363Right-handed alpha
Helix 46
46
B
368 386Right-handed alpha
Helix 47
47
B
386 403Right-handed alpha
Helix 48
48
B
408 431Right-handed alpha
Helix 49
49
B
443 463Right-handed alpha
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There are no sheets in PDB entry 4JA3
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il