Analysis of interatomic Contacts of Structural Units in PDB entry:
4JBH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JBH entry

There are 4 chains in PDB entry 4JBH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1PRO 331
B
 HIS -1PRO 331
C
 HIS -1PRO 331
D
 HIS -1PRO 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 4JBH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 14Right-handed 310
Helix 2
2
A
39 47Right-handed alpha
Helix 3
3
A
94 99Right-handed alpha
Helix 4
4
A
100 105Right-handed 310
Helix 5
5
A
138 143Right-handed alpha
Helix 6
6
A
147 159Right-handed alpha
Helix 7
7
A
174 187Right-handed alpha
Helix 8
8
A
197 208Right-handed alpha
Helix 9
9
A
215 223Right-handed alpha
Helix 10
10
A
232 235Right-handed 310
Helix 11
11
A
236 243Right-handed alpha
Helix 12
12
A
264 272Right-handed alpha
Helix 13
13
A
282 295Right-handed alpha
Helix 14
14
A
310 320Right-handed alpha
Helix 15
15
B
10 14Right-handed 310
Helix 16
16
B
39 47Right-handed alpha
Helix 17
17
B
94 99Right-handed alpha
Helix 18
18
B
100 105Right-handed 310
Helix 19
19
B
138 143Right-handed alpha
Helix 20
20
B
147 159Right-handed alpha
Helix 21
21
B
174 187Right-handed alpha
Helix 22
22
B
197 208Right-handed alpha
Helix 23
23
B
215 223Right-handed alpha
Helix 24
24
B
234 238Right-handed 310
Helix 25
25
B
240 242Right-handed 310
Helix 26
26
B
264 272Right-handed alpha
Helix 27
27
B
282 295Right-handed alpha
Helix 28
28
B
310 318Right-handed alpha
Helix 29
29
C
10 14Right-handed 310
Helix 30
30
C
39 47Right-handed alpha
Helix 31
31
C
94 99Right-handed alpha
Helix 32
32
C
100 105Right-handed 310
Helix 33
33
C
138 143Right-handed alpha
Helix 34
34
C
147 159Right-handed alpha
Helix 35
35
C
174 187Right-handed alpha
Helix 36
36
C
197 208Right-handed alpha
Helix 37
37
C
215 223Right-handed alpha
Helix 38
38
C
236 241Right-handed alpha
Helix 39
39
C
264 272Right-handed alpha
Helix 40
40
C
282 295Right-handed alpha
Helix 41
41
C
310 318Right-handed alpha
Helix 42
42
D
10 14Right-handed 310
Helix 43
43
D
39 48Right-handed alpha
Helix 44
44
D
94 99Right-handed alpha
Helix 45
45
D
100 105Right-handed 310
Helix 46
46
D
141 145Right-handed 310
Helix 47
47
D
147 160Right-handed alpha
Helix 48
48
D
174 187Right-handed alpha
Helix 49
49
D
197 208Right-handed alpha
Helix 50
50
D
215 223Right-handed alpha
Helix 51
51
D
236 243Right-handed alpha
Helix 52
52
D
264 272Right-handed alpha
Helix 53
53
D
282 295Right-handed alpha
Helix 54
54
D
310 317Right-handed alpha
Helix 55
55
D
318 320Right-handed 310
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There are 16 sheets in PDB entry 4JBH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
0 5first strand
Strand 2
A
15 20anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 128first strand
Strand 2
A
28 38anti-parallel
Strand 3
A
63 70anti-parallel
Strand 4
A
82 85anti-parallel
Strand 5
A
132 134anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 128first strand
Strand 2
A
28 38anti-parallel
Strand 3
A
326 330anti-parallel
Strand 4
A
302 307parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 214first strand
Strand 2
A
190 194parallel
Strand 3
A
166 169parallel
Strand 4
A
225 230parallel
Strand 5
A
244 252parallel
Strand 6
A
274 277parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
0 5first strand
Strand 2
B
15 20anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 128first strand
Strand 2
B
28 38anti-parallel
Strand 3
B
63 70anti-parallel
Strand 4
B
82 85anti-parallel
Strand 5
B
132 134anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 128first strand
Strand 2
B
28 38anti-parallel
Strand 3
B
326 330anti-parallel
Strand 4
B
302 307parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
212 214first strand
Strand 2
B
190 194parallel
Strand 3
B
166 170parallel
Strand 4
B
225 230parallel
Strand 5
B
244 252parallel
Strand 6
B
274 277parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
0 5first strand
Strand 2
C
15 20anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
124 128first strand
Strand 2
C
28 38anti-parallel
Strand 3
C
63 70anti-parallel
Strand 4
C
82 85anti-parallel
Strand 5
C
132 134anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
124 128first strand
Strand 2
C
28 38anti-parallel
Strand 3
C
326 330anti-parallel
Strand 4
C
302 307parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
212 214first strand
Strand 2
C
190 194parallel
Strand 3
C
166 169parallel
Strand 4
C
225 230parallel
Strand 5
C
244 252parallel
Strand 6
C
274 277parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
0 5first strand
Strand 2
D
15 20anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
124 128first strand
Strand 2
D
28 38anti-parallel
Strand 3
D
63 70anti-parallel
Strand 4
D
82 85anti-parallel
Strand 5
D
132 134anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
124 128first strand
Strand 2
D
28 38anti-parallel
Strand 3
D
326 330anti-parallel
Strand 4
D
302 307parallel
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There are 6 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
212 214first strand
Strand 2
D
190 194parallel
Strand 3
D
166 170parallel
Strand 4
D
225 230parallel
Strand 5
D
244 252parallel
Strand 6
D
274 277parallel
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