Analysis of interatomic Contacts of Structural Units in PDB entry:
4JCC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JCC entry

There is 1 chain in PDB entry 4JCC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 37LEU 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4JCC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
64 74Right-handed alpha
Helix 2
2
A
76 78Right-handed 310
Helix 3
3
A
89 99Right-handed 310
Helix 4
4
A
109 116Right-handed alpha
Helix 5
5
A
124 129Right-handed 310
Helix 6
6
A
130 138Right-handed alpha
Helix 7
7
A
149 164Right-handed alpha
Helix 8
8
A
165 193Right-handed alpha
Helix 9
9
A
217 222Right-handed alpha
Helix 10
10
A
243 251Right-handed alpha
Helix 11
11
A
260 264Right-handed alpha
Helix 12
12
A
267 272Right-handed 310
Helix 13
13
A
277 282Right-handed alpha
Helix 14
14
A
283 288Right-handed alpha
Helix 15
15
A
295 302Right-handed alpha
Helix 16
16
A
305 317Right-handed alpha
Helix 17
17
A
318 320Right-handed 310
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There are 4 sheets in PDB entry 4JCC. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 44first strand
Strand 2
A
51 53anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
80 83parallel
Strand 3
A
60 62parallel
Strand 4
A
120 122parallel
Strand 5
A
140 141parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 228first strand
Strand 2
A
197 204parallel
Strand 3
A
207 211anti-parallel
Strand 4
A
240 241anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 228first strand
Strand 2
A
197 204parallel
Strand 3
A
254 259parallel
Strand 4
A
291 293parallel
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