Analysis of interatomic Contacts of Structural Units in PDB entry:
4JEJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JEJ entry

There is 1 chain in PDB entry 4JEJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4LEU 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4JEJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 19Right-handed alpha
Helix 2
2
A
29 33Right-handed 310
Helix 3
3
A
34 36Right-handed 310
Helix 4
4
A
37 48Right-handed alpha
Helix 5
5
A
61 76Right-handed alpha
Helix 6
6
A
86 90Right-handed 310
Helix 7
7
A
112 123Right-handed alpha
Helix 8
8
A
143 150Right-handed alpha
Helix 9
9
A
158 173Right-handed alpha
Helix 10
10
A
190 201Right-handed alpha
Helix 11
11
A
213 224Right-handed alpha
Helix 12
12
A
231 237Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4JEJ.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 28first strand
Strand 2
A
52 56parallel
Strand 3
A
80 83parallel
Strand 4
A
96 102parallel
Strand 5
A
128 136parallel
Strand 6
A
176 180parallel
Strand 7
A
205 208parallel
Strand 8
A
227 230parallel
Strand 9
A
23 28parallel
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