Analysis of interatomic Contacts of Structural Units in PDB entry:
4JEN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JEN entry

There are 3 chains in PDB entry 4JEN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3TYR 145
B
 LYS 3LEU 146
C
 LYS 3LEU 144
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4JEN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 39Right-handed alpha
Helix 2
2
A
59 74Right-handed alpha
Helix 3
3
A
86 100Right-handed alpha
Helix 4
4
A
115 120Right-handed alpha
Helix 5
5
A
121 124Right-handed 310
Helix 6
6
A
134 145Right-handed alpha
Helix 7
7
B
23 39Right-handed alpha
Helix 8
8
B
59 74Right-handed alpha
Helix 9
9
B
86 100Right-handed alpha
Helix 10
10
B
115 120Right-handed alpha
Helix 11
11
B
121 124Right-handed 310
Helix 12
12
B
134 145Right-handed alpha
Helix 13
13
C
26 39Right-handed alpha
Helix 14
14
C
60 74Right-handed alpha
Helix 15
15
C
86 100Right-handed alpha
Helix 16
16
C
115 120Right-handed alpha
Helix 17
17
C
121 124Right-handed 310
Helix 18
18
C
134 144Right-handed alpha
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There are 3 sheets in PDB entry 4JEN. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
4 8parallel
Strand 3
A
76 79parallel
Strand 4
A
102 108parallel
Strand 5
A
127 132parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
B
4 8parallel
Strand 3
B
76 79parallel
Strand 4
B
102 108parallel
Strand 5
B
127 132parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 44first strand
Strand 2
C
4 8parallel
Strand 3
C
76 79parallel
Strand 4
C
102 108parallel
Strand 5
C
127 132parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il