Analysis of interatomic Contacts of Structural Units in PDB entry:
4JF3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JF3 entry

There are 2 chains in PDB entry 4JF3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 423ASP 512
B
 SER 421ASP 512
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4JF3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
423 468Right-handed alpha
Helix 2
2
A
469 472Right-handed 310
Helix 3
3
A
473 479Right-handed alpha
Helix 4
4
A
488 512Right-handed alpha
Helix 5
5
B
422 468Right-handed alpha
Helix 6
6
B
469 472Right-handed 310
Helix 7
7
B
473 479Right-handed alpha
Helix 8
8
B
488 512Right-handed alpha
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There are no sheets in PDB entry 4JF3
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il