Analysis of interatomic Contacts of Structural Units in PDB entry:
4JFC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JFC entry

There is 1 chain in PDB entry 4JFC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3ARG 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4JFC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 24Right-handed 310
Helix 2
2
A
28 43Right-handed alpha
Helix 3
3
A
65 73Right-handed alpha
Helix 4
4
A
76 97Right-handed alpha
Helix 5
5
A
111 120Right-handed alpha
Helix 6
6
A
134 139Right-handed 310
Helix 7
7
A
145 154Right-handed alpha
Helix 8
8
A
155 164Right-handed alpha
Helix 9
9
A
171 178Right-handed alpha
Helix 10
10
A
188 202Right-handed alpha
Helix 11
11
A
204 219Right-handed alpha
Helix 12
12
A
222 240Right-handed alpha
Helix 13
13
A
240 252Right-handed alpha
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There are 2 sheets in PDB entry 4JFC. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 10first strand
Strand 2
A
13 19anti-parallel
Strand 3
A
50 55parallel
Strand 4
A
101 105parallel
Strand 5
A
122 126parallel
Strand 6
A
182 184parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 110first strand
Strand 2
A
130 132parallel
Strand 3
A
169 170anti-parallel
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