Analysis of interatomic Contacts of Structural Units in PDB entry:
4JG3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JG3 entry

There is 1 chain in PDB entry 4JG3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1ILE 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 4JG3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 20Right-handed alpha
Helix 2
2
A
21 28Right-handed alpha
Helix 3
3
A
44 52Right-handed 310
Helix 4
4
A
65 69Right-handed 310
Helix 5
5
A
88 93Right-handed alpha
Helix 6
6
A
118 140Right-handed alpha
Helix 7
7
A
157 161Right-handed 310
Helix 8
8
A
163 168Right-handed alpha
Helix 9
9
A
174 186Right-handed alpha
Helix 10
10
A
193 198Right-handed alpha
Helix 11
11
A
210 216Right-handed alpha
Helix 12
12
A
229 232Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 4JG3. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 61first strand
Strand 2
A
71 75anti-parallel
Strand 3
A
33 37anti-parallel
Strand 4
A
4 10parallel
Strand 5
A
252 256anti-parallel
Strand 6
A
235 239anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 84first strand
Strand 2
A
97 101anti-parallel
Strand 3
A
105 111anti-parallel
Strand 4
A
145 151parallel
Strand 5
A
223 227anti-parallel
Strand 6
A
191 192anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il