Analysis of interatomic Contacts of Structural Units in PDB entry:
4JG5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JG5 entry

There is 1 chain in PDB entry 4JG5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 29HIS 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 4JG5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
50 54Right-handed 310
Helix 2
2
A
118 122Right-handed 310
Helix 3
3
A
124 129Right-handed alpha
Helix 4
4
A
136 138Right-handed 310
Helix 5
5
A
165 176Right-handed 310
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There are 6 sheets in PDB entry 4JG5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 85first strand
Strand 2
A
65 72anti-parallel
Strand 3
A
106 112anti-parallel
Strand 4
A
145 146anti-parallel
Strand 5
A
180 184anti-parallel
Strand 6
A
34 41parallel
Strand 7
A
150 151first strand
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 99first strand
Strand 2
A
34 41anti-parallel
Strand 3
A
180 184parallel
Strand 4
A
145 146anti-parallel
Strand 5
A
106 112anti-parallel
Strand 6
A
160 163first strand
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 134first strand
Strand 2
A
221 223anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 268first strand
Strand 2
A
186 197anti-parallel
Strand 3
A
320 329parallel
Strand 4
A
357 364anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 246first strand
Strand 2
A
208 216anti-parallel
Strand 3
A
251 252anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 246first strand
Strand 2
A
208 216anti-parallel
Strand 3
A
278 285anti-parallel
Strand 4
A
294 301anti-parallel
Strand 5
A
352 353parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il