Analysis of interatomic Contacts of Structural Units in PDB entry:
4JGG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JGG entry

There are 2 chains in PDB entry 4JGG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1LEU 180
B
 GLN 1LEU 180
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4JGG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 13Right-handed alpha
Helix 2
2
A
17 20Right-handed 310
Helix 3
3
A
21 33Right-handed alpha
Helix 4
4
A
48 64Right-handed alpha
Helix 5
5
A
73 79Right-handed alpha
Helix 6
6
A
82 101Right-handed alpha
Helix 7
7
A
112 115Right-handed 310
Helix 8
8
A
116 135Right-handed alpha
Helix 9
9
A
161 163Right-handed 310
Helix 10
10
A
164 177Right-handed alpha
Helix 11
11
A
178 180Right-handed 310
Helix 12
12
B
8 13Right-handed alpha
Helix 13
13
B
17 20Right-handed 310
Helix 14
14
B
21 33Right-handed alpha
Helix 15
15
B
48 64Right-handed alpha
Helix 16
16
B
73 79Right-handed alpha
Helix 17
17
B
82 101Right-handed alpha
Helix 18
18
B
112 115Right-handed 310
Helix 19
19
B
116 135Right-handed alpha
Helix 20
20
B
161 163Right-handed 310
Helix 21
21
B
164 177Right-handed alpha
Helix 22
22
B
178 180Right-handed 310
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There are 2 sheets in PDB entry 4JGG. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 41first strand
Strand 2
A
2 7parallel
Strand 3
A
67 71parallel
Strand 4
A
103 107parallel
Strand 5
A
137 139parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 41first strand
Strand 2
B
2 7parallel
Strand 3
B
67 71parallel
Strand 4
B
103 107parallel
Strand 5
B
137 139parallel
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