Analysis of interatomic Contacts of Structural Units in PDB entry:
4JGW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JGW entry

There are 2 chains in PDB entry 4JGW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 50PRO 512
B
 ALA 53GLY 514
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 4JGW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
96 105Right-handed alpha
Helix 2
2
A
108 113Right-handed alpha
Helix 3
3
A
115 124Right-handed alpha
Helix 4
4
A
125 127Right-handed 310
Helix 5
5
A
129 143Right-handed alpha
Helix 6
6
A
148 170Right-handed alpha
Helix 7
7
A
171 174Right-handed 310
Helix 8
8
A
178 193Right-handed alpha
Helix 9
9
A
205 214Right-handed alpha
Helix 10
10
A
235 242Right-handed 310
Helix 11
11
A
243 261Right-handed alpha
Helix 12
12
A
263 268Right-handed 310
Helix 13
13
A
284 306Right-handed alpha
Helix 14
14
A
324 345Right-handed alpha
Helix 15
15
A
347 360Right-handed alpha
Helix 16
16
A
360 365Right-handed alpha
Helix 17
17
A
366 372Right-handed alpha
Helix 18
18
A
374 386Right-handed alpha
Helix 19
19
A
432 446Right-handed alpha
Helix 20
20
A
457 478Right-handed alpha
Helix 21
21
A
485 495Right-handed alpha
Helix 22
22
A
499 511Right-handed alpha
Helix 23
23
B
96 105Right-handed alpha
Helix 24
24
B
108 113Right-handed alpha
Helix 25
25
B
115 124Right-handed alpha
Helix 26
26
B
125 127Right-handed 310
Helix 27
27
B
129 143Right-handed alpha
Helix 28
28
B
148 170Right-handed alpha
Helix 29
29
B
171 174Right-handed 310
Helix 30
30
B
175 177Right-handed 310
Helix 31
31
B
178 193Right-handed alpha
Helix 32
32
B
205 216Right-handed alpha
Helix 33
33
B
235 242Right-handed 310
Helix 34
34
B
243 261Right-handed alpha
Helix 35
35
B
263 267Right-handed 310
Helix 36
36
B
268 273Right-handed alpha
Helix 37
37
B
284 306Right-handed alpha
Helix 38
38
B
324 345Right-handed alpha
Helix 39
39
B
347 360Right-handed alpha
Helix 40
40
B
360 365Right-handed alpha
Helix 41
41
B
366 372Right-handed alpha
Helix 42
42
B
374 386Right-handed alpha
Helix 43
43
B
431 446Right-handed alpha
Helix 44
44
B
457 478Right-handed alpha
Helix 45
45
B
485 494Right-handed alpha
Helix 46
46
B
499 511Right-handed alpha
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There are 4 sheets in PDB entry 4JGW. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 62first strand
Strand 2
A
65 74anti-parallel
Strand 3
A
87 95anti-parallel
Strand 4
A
455 456anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 310first strand
Strand 2
A
318 320anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 62first strand
Strand 2
B
65 73anti-parallel
Strand 3
B
87 95anti-parallel
Strand 4
B
455 456anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
308 310first strand
Strand 2
B
318 320anti-parallel
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