Analysis of interatomic Contacts of Structural Units in PDB entry:
4JHJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JHJ entry

There are 4 chains in PDB entry 4JHJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 7ASP 222
B
 GLU 7TYR 217
C
 ALA 2ILE 20
D
 ALA 2ILE 20
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 31 helices in PDB entry 4JHJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 14Right-handed 310
Helix 2
2
A
15 26Right-handed alpha
Helix 3
3
A
33 48Right-handed alpha
Helix 4
4
A
48 71Right-handed alpha
Helix 5
5
A
73 89Right-handed alpha
Helix 6
6
A
89 97Right-handed alpha
Helix 7
7
A
97 115Right-handed alpha
Helix 8
8
A
125 137Right-handed alpha
Helix 9
9
A
138 144Right-handed alpha
Helix 10
10
A
144 158Right-handed alpha
Helix 11
11
A
158 166Right-handed alpha
Helix 12
12
A
166 184Right-handed alpha
Helix 13
13
A
188 204Right-handed alpha
Helix 14
14
A
209 218Right-handed alpha
Helix 15
15
B
10 14Right-handed 310
Helix 16
16
B
17 28Right-handed alpha
Helix 17
17
B
29 32Right-handed 310
Helix 18
18
B
33 48Right-handed alpha
Helix 19
19
B
54 70Right-handed alpha
Helix 20
20
B
74 89Right-handed alpha
Helix 21
21
B
90 97Right-handed alpha
Helix 22
22
B
98 115Right-handed alpha
Helix 23
23
B
125 137Right-handed alpha
Helix 24
24
B
138 144Right-handed alpha
Helix 25
25
B
146 158Right-handed alpha
Helix 26
26
B
158 166Right-handed alpha
Helix 27
27
B
166 183Right-handed alpha
Helix 28
28
B
188 204Right-handed alpha
Helix 29
29
B
209 217Right-handed alpha
Helix 30
30
C
5 19Right-handed alpha
Helix 31
31
D
5 18Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4JHJ. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 117first strand
Strand 2
A
120 121anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 117first strand
Strand 2
B
120 121anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il