Analysis of interatomic Contacts of Structural Units in PDB entry:
4JJY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JJY entry

There are 2 chains in PDB entry 4JJY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 361ARG 702
B
 VAL 361ARG 702
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4JJY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
367 399Right-handed alpha
Helix 2
2
A
414 427Right-handed alpha
Helix 3
3
A
429 439Right-handed alpha
Helix 4
4
A
439 472Right-handed alpha
Helix 5
5
A
485 516Right-handed alpha
Helix 6
6
A
516 524Right-handed alpha
Helix 7
7
A
526 534Right-handed alpha
Helix 8
8
A
549 575Right-handed alpha
Helix 9
9
A
580 591Right-handed alpha
Helix 10
10
A
595 608Right-handed alpha
Helix 11
11
A
608 637Right-handed alpha
Helix 12
12
A
646 673Right-handed alpha
Helix 13
13
A
674 702Right-handed alpha
Helix 14
14
B
367 399Right-handed alpha
Helix 15
15
B
414 427Right-handed alpha
Helix 16
16
B
429 439Right-handed alpha
Helix 17
17
B
439 472Right-handed alpha
Helix 18
18
B
485 516Right-handed alpha
Helix 19
19
B
516 524Right-handed alpha
Helix 20
20
B
526 534Right-handed alpha
Helix 21
21
B
546 575Right-handed alpha
Helix 22
22
B
581 591Right-handed alpha
Helix 23
23
B
595 608Right-handed alpha
Helix 24
24
B
608 637Right-handed alpha
Helix 25
25
B
645 673Right-handed alpha
Helix 26
26
B
674 702Right-handed alpha
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There are no sheets in PDB entry 4JJY
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il