Analysis of interatomic Contacts of Structural Units in PDB entry:
4JKT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JKT entry

There are 4 chains in PDB entry 4JKT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 144ARG 549
B
 LEU 144ARG 549
C
 LEU 144ARG 549
D
 LEU 144ARG 549
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 4JKT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
144 151Right-handed alpha
Helix 2
2
A
160 170Right-handed alpha
Helix 3
3
A
177 179Right-handed 310
Helix 4
4
A
180 191Right-handed alpha
Helix 5
5
A
201 210Right-handed alpha
Helix 6
6
A
212 221Right-handed alpha
Helix 7
7
A
228 244Right-handed alpha
Helix 8
8
A
255 261Right-handed alpha
Helix 9
9
A
293 306Right-handed alpha
Helix 10
10
A
306 311Right-handed alpha
Helix 11
11
A
339 348Right-handed alpha
Helix 12
12
A
355 370Right-handed alpha
Helix 13
13
A
379 389Right-handed alpha
Helix 14
14
A
390 403Right-handed alpha
Helix 15
15
A
411 424Right-handed alpha
Helix 16
16
A
428 440Right-handed alpha
Helix 17
17
A
454 469Right-handed alpha
Helix 18
18
A
470 472Right-handed 310
Helix 19
19
A
473 481Right-handed alpha
Helix 20
20
A
516 530Right-handed alpha
Helix 21
21
B
145 151Right-handed alpha
Helix 22
22
B
160 170Right-handed alpha
Helix 23
23
B
177 179Right-handed 310
Helix 24
24
B
180 191Right-handed alpha
Helix 25
25
B
201 209Right-handed alpha
Helix 26
26
B
212 221Right-handed alpha
Helix 27
27
B
228 245Right-handed alpha
Helix 28
28
B
292 306Right-handed alpha
Helix 29
29
B
306 311Right-handed alpha
Helix 30
30
B
339 347Right-handed alpha
Helix 31
31
B
355 371Right-handed alpha
Helix 32
32
B
379 390Right-handed alpha
Helix 33
33
B
390 403Right-handed alpha
Helix 34
34
B
411 424Right-handed alpha
Helix 35
35
B
428 441Right-handed alpha
Helix 36
36
B
454 468Right-handed alpha
Helix 37
37
B
470 472Right-handed 310
Helix 38
38
B
473 481Right-handed alpha
Helix 39
39
B
516 530Right-handed alpha
Helix 40
40
C
145 151Right-handed alpha
Helix 41
41
C
160 171Right-handed alpha
Helix 42
42
C
177 179Right-handed 310
Helix 43
43
C
180 190Right-handed alpha
Helix 44
44
C
201 210Right-handed alpha
Helix 45
45
C
212 221Right-handed alpha
Helix 46
46
C
228 245Right-handed alpha
Helix 47
47
C
292 311Right-handed alpha
Helix 48
48
C
339 349Right-handed alpha
Helix 49
49
C
355 371Right-handed alpha
Helix 50
50
C
379 388Right-handed alpha
Helix 51
51
C
390 403Right-handed alpha
Helix 52
52
C
411 424Right-handed alpha
Helix 53
53
C
428 441Right-handed alpha
Helix 54
54
C
454 469Right-handed alpha
Helix 55
55
C
470 472Right-handed 310
Helix 56
56
C
473 481Right-handed alpha
Helix 57
57
C
516 530Right-handed alpha
Helix 58
58
D
145 150Right-handed alpha
Helix 59
59
D
161 170Right-handed alpha
Helix 60
60
D
177 179Right-handed 310
Helix 61
61
D
180 192Right-handed alpha
Helix 62
62
D
201 210Right-handed alpha
Helix 63
63
D
212 221Right-handed alpha
Helix 64
64
D
228 245Right-handed alpha
Helix 65
65
D
290 292Right-handed 310
Helix 66
66
D
293 305Right-handed alpha
Helix 67
67
D
306 311Right-handed alpha
Helix 68
68
D
339 348Right-handed alpha
Helix 69
69
D
355 371Right-handed alpha
Helix 70
70
D
380 390Right-handed alpha
Helix 71
71
D
390 403Right-handed alpha
Helix 72
72
D
411 423Right-handed alpha
Helix 73
73
D
428 441Right-handed alpha
Helix 74
74
D
454 469Right-handed alpha
Helix 75
75
D
470 472Right-handed 310
Helix 76
76
D
473 481Right-handed alpha
Helix 77
77
D
516 530Right-handed alpha
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There are 13 sheets in PDB entry 4JKT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 251first strand
Strand 2
A
509 510anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 281first strand
Strand 2
A
267 272anti-parallel
Strand 3
A
501 506anti-parallel
Strand 4
A
492 497anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 288first strand
Strand 2
A
425 427anti-parallel
Strand 3
A
376 378anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
250 251first strand
Strand 2
B
509 510anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
277 281first strand
Strand 2
B
267 272anti-parallel
Strand 3
B
501 506anti-parallel
Strand 4
B
492 497anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
287 288first strand
Strand 2
B
425 427anti-parallel
Strand 3
B
376 378anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
250 251first strand
Strand 2
C
509 510anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
277 281first strand
Strand 2
C
267 272anti-parallel
Strand 3
C
501 506anti-parallel
Strand 4
C
492 497anti-parallel
Strand 5
C
485 487anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
287 288first strand
Strand 2
C
425 427anti-parallel
Strand 3
C
377 378anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
159 160first strand
Strand 2
D
199 200anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
250 251first strand
Strand 2
D
509 510anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
277 281first strand
Strand 2
D
267 272anti-parallel
Strand 3
D
501 506anti-parallel
Strand 4
D
492 497anti-parallel
Strand 5
D
485 487anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
287 288first strand
Strand 2
D
425 427anti-parallel
Strand 3
D
377 378anti-parallel
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