Analysis of interatomic Contacts of Structural Units in PDB entry:
4JNV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JNV entry

There are 4 chains in PDB entry 4JNV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 451LYS 481
B
 ASP 457VAL 490
C
 SER 451ASP 482
D
 ARG 460VAL 490
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 4JNV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
456 481Right-handed alpha
Helix 2
2
B
458 484Right-handed alpha
Helix 3
3
C
456 482Right-handed alpha
Helix 4
4
D
462 484Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4JNV.

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
488 489first strand
Strand 2
A
452 455anti-parallel
Strand 3
C
452 455anti-parallel
Strand 4
D
488 489anti-parallel
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