Analysis of interatomic Contacts of Structural Units in PDB entry:
4JNZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JNZ entry

There is 1 chain in PDB entry 4JNZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 87ASP 610
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4JNZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
89 98Right-handed alpha
Helix 2
2
A
102 115Right-handed alpha
Helix 3
3
A
117 137Right-handed alpha
Helix 4
4
A
140 155Right-handed alpha
Helix 5
5
A
158 174Right-handed alpha
Helix 6
6
A
177 187Right-handed alpha
Helix 7
7
A
207 213Right-handed alpha
Helix 8
8
A
227 236Right-handed alpha
Helix 9
9
A
243 257Right-handed alpha
Helix 10
10
A
258 260Right-handed 310
Helix 11
11
A
264 270Right-handed alpha
Helix 12
12
A
272 277Right-handed alpha
Helix 13
13
A
293 316Right-handed alpha
Helix 14
14
A
318 323Right-handed alpha
Helix 15
15
A
329 333Right-handed 310
Helix 16
16
A
336 340Right-handed 310
Helix 17
17
A
341 364Right-handed alpha
Helix 18
18
A
373 375Right-handed 310
Helix 19
19
A
376 389Right-handed alpha
Helix 20
20
A
390 394Right-handed 310
Helix 21
21
A
409 425Right-handed alpha
Helix 22
22
A
437 449Right-handed alpha
Helix 23
23
A
458 475Right-handed alpha
Helix 24
24
A
488 499Right-handed alpha
Helix 25
25
A
504 508Right-handed 310
Helix 26
26
A
517 522Right-handed alpha
Helix 27
27
A
527 531Right-handed 310
Helix 28
28
A
545 548Right-handed 310
Helix 29
29
A
549 562Right-handed alpha
Helix 30
30
A
565 570Right-handed alpha
Helix 31
31
A
576 581Right-handed alpha
Helix 32
32
A
583 596Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4JNZ.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 286first strand
Strand 2
A
325 328parallel
Strand 3
A
367 369parallel
Strand 4
A
399 404parallel
Strand 5
A
428 433parallel
Strand 6
A
480 485parallel
Strand 7
A
509 513parallel
Strand 8
A
537 543parallel
Strand 9
A
281 286parallel
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