Analysis of interatomic Contacts of Structural Units in PDB entry:
4JPX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JPX entry

There is 1 chain in PDB entry 4JPX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 7LEU 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4JPX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 17Right-handed alpha
Helix 2
2
A
32 36Right-handed 310
Helix 3
3
A
37 55Right-handed alpha
Helix 4
4
A
60 70Right-handed alpha
Helix 5
5
A
79 92Right-handed alpha
Helix 6
6
A
103 113Right-handed alpha
Helix 7
7
A
124 128Right-handed 310
Helix 8
8
A
135 144Right-handed alpha
Helix 9
9
A
145 148Right-handed 310
Helix 10
10
A
149 162Right-handed alpha
Helix 11
11
A
162 169Right-handed alpha
Helix 12
12
A
171 182Right-handed alpha
Helix 13
13
A
206 214Right-handed alpha
Helix 14
14
A
223 229Right-handed alpha
Helix 15
15
A
246 254Right-handed alpha
Helix 16
16
A
258 267Right-handed alpha
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There are 2 sheets in PDB entry 4JPX. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 98first strand
Strand 2
A
115 119parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 196first strand
Strand 2
A
187 188anti-parallel
Strand 3
A
240 244parallel
Strand 4
A
218 221parallel
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