Analysis of interatomic Contacts of Structural Units in PDB entry:
4JQ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JQ5 entry

There are 12 chains in PDB entry 4JQ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 327LEU 411
B
 ALA 327LEU 411
C
 ALA 327LEU 411
D
 ALA 327LEU 411
E
 SER 326LEU 411
F
 SER 326LEU 411
G
 SER 326LEU 411
H
 ALA 327LEU 411
I
 SER 326LEU 411
J
 SER 326LEU 411
K
 SER 326LEU 411
L
 SER 326LEU 411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 4JQ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
327 358Right-handed alpha
Helix 2
2
A
367 410Right-handed alpha
Helix 3
3
B
328 363Right-handed alpha
Helix 4
4
B
367 411Right-handed alpha
Helix 5
5
C
328 361Right-handed alpha
Helix 6
6
C
367 410Right-handed alpha
Helix 7
7
D
328 363Right-handed alpha
Helix 8
8
D
367 411Right-handed alpha
Helix 9
9
E
327 364Right-handed alpha
Helix 10
10
E
367 411Right-handed alpha
Helix 11
11
F
327 364Right-handed alpha
Helix 12
12
F
367 411Right-handed alpha
Helix 13
13
G
328 361Right-handed alpha
Helix 14
14
G
367 411Right-handed alpha
Helix 15
15
H
328 361Right-handed alpha
Helix 16
16
H
367 411Right-handed alpha
Helix 17
17
I
327 364Right-handed alpha
Helix 18
18
I
367 410Right-handed alpha
Helix 19
19
J
327 360Right-handed alpha
Helix 20
20
J
367 411Right-handed alpha
Helix 21
21
K
327 360Right-handed alpha
Helix 22
22
K
367 410Right-handed alpha
Helix 23
23
L
327 360Right-handed alpha
Helix 24
24
L
367 411Right-handed alpha
Back to top of page
There are no sheets in PDB entry 4JQ5
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il