Analysis of interatomic Contacts of Structural Units in PDB entry:
4JQ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JQ6 entry

There are 3 chains in PDB entry 4JQ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 9SER 231
B
 ASP 9LYS 228
C
 ASP 9THR 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 4JQ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 33Right-handed alpha
Helix 2
2
A
37 39Right-handed 310
Helix 3
3
A
40 69Right-handed alpha
Helix 4
4
A
72 96Right-handed alpha
Helix 5
5
A
106 125Right-handed alpha
Helix 6
6
A
129 150Right-handed alpha
Helix 7
7
A
171 192Right-handed alpha
Helix 8
8
A
197 229Right-handed alpha
Helix 9
9
B
10 33Right-handed alpha
Helix 10
10
B
37 39Right-handed 310
Helix 11
11
B
40 69Right-handed alpha
Helix 12
12
B
72 97Right-handed alpha
Helix 13
13
B
105 125Right-handed alpha
Helix 14
14
B
129 150Right-handed alpha
Helix 15
15
B
164 176Right-handed alpha
Helix 16
16
B
177 192Right-handed alpha
Helix 17
17
B
197 228Right-handed alpha
Helix 18
18
C
10 33Right-handed alpha
Helix 19
19
C
34 36Right-handed 310
Helix 20
20
C
37 69Right-handed alpha
Helix 21
21
C
72 96Right-handed alpha
Helix 22
22
C
106 125Right-handed alpha
Helix 23
23
C
129 147Right-handed alpha
Helix 24
24
C
166 192Right-handed alpha
Helix 25
25
C
197 230Right-handed alpha
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There are no sheets in PDB entry 4JQ6
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il