Analysis of interatomic Contacts of Structural Units in PDB entry:
4JQZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JQZ entry

There are 2 chains in PDB entry 4JQZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 33HIS 277
B
 ALA 33HIS 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4JQZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
66 81Right-handed alpha
Helix 2
2
A
92 105Right-handed alpha
Helix 3
3
A
106 109Right-handed 310
Helix 4
4
A
135 141Right-handed alpha
Helix 5
5
A
142 144Right-handed 310
Helix 6
6
A
213 227Right-handed alpha
Helix 7
7
A
231 249Right-handed alpha
Helix 8
8
B
68 81Right-handed alpha
Helix 9
9
B
92 106Right-handed alpha
Helix 10
10
B
135 141Right-handed alpha
Helix 11
11
B
142 144Right-handed 310
Helix 12
12
B
148 152Right-handed 310
Helix 13
13
B
213 227Right-handed alpha
Helix 14
14
B
231 249Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4JQZ.

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 89first strand
Strand 2
A
43 51parallel
Strand 3
A
111 121parallel
Strand 4
A
156 163parallel
Strand 5
A
193 198parallel
Strand 6
A
264 267anti-parallel
Strand 7
B
264 267anti-parallel
Strand 8
B
193 198anti-parallel
Strand 9
B
156 161parallel
Strand 10
B
113 119parallel
Strand 11
B
45 51parallel
Strand 12
B
84 89parallel
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