Analysis of interatomic Contacts of Structural Units in PDB entry:
4JUR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JUR entry

There are 16 chains in PDB entry 4JUR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1PRO 161
B
 ASN 2PRO 161
C
 MSE 1PRO 161
D
 ASN 2PRO 161
E
 ASN 2PRO 161
F
 ASN 2PRO 161
G
 ASN 2PRO 161
H
 ARG 3PRO 161
I
 THR 20SER 116
J
 GLN 19SER 115
K
 THR 20SER 116
L
 THR 20SER 116
M
 GLN 19SER 115
N
 THR 20SER 116
O
 THR 20SER 115
P
 THR 20SER 116
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 97 helices in PDB entry 4JUR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 17Right-handed alpha
Helix 2
2
A
19 28Right-handed alpha
Helix 3
3
A
28 37Right-handed alpha
Helix 4
4
A
43 55Right-handed alpha
Helix 5
5
A
79 92Right-handed alpha
Helix 6
6
A
102 107Right-handed 310
Helix 7
7
B
5 16Right-handed alpha
Helix 8
8
B
19 28Right-handed alpha
Helix 9
9
B
28 37Right-handed alpha
Helix 10
10
B
43 55Right-handed alpha
Helix 11
11
B
79 92Right-handed alpha
Helix 12
12
B
102 107Right-handed 310
Helix 13
13
B
144 148Right-handed 310
Helix 14
14
C
5 17Right-handed alpha
Helix 15
15
C
19 27Right-handed alpha
Helix 16
16
C
28 37Right-handed alpha
Helix 17
17
C
43 54Right-handed alpha
Helix 18
18
C
79 91Right-handed alpha
Helix 19
19
C
102 107Right-handed 310
Helix 20
20
D
5 17Right-handed alpha
Helix 21
21
D
19 27Right-handed alpha
Helix 22
22
D
28 37Right-handed alpha
Helix 23
23
D
43 55Right-handed alpha
Helix 24
24
D
79 91Right-handed alpha
Helix 25
25
D
102 107Right-handed 310
Helix 26
26
E
5 17Right-handed alpha
Helix 27
27
E
19 28Right-handed alpha
Helix 28
28
E
28 37Right-handed alpha
Helix 29
29
E
43 55Right-handed alpha
Helix 30
30
E
79 92Right-handed alpha
Helix 31
31
E
102 107Right-handed alpha
Helix 32
32
F
5 16Right-handed alpha
Helix 33
33
F
19 28Right-handed alpha
Helix 34
34
F
28 37Right-handed alpha
Helix 35
35
F
43 55Right-handed alpha
Helix 36
36
F
79 91Right-handed alpha
Helix 37
37
F
102 106Right-handed 310
Helix 38
38
G
5 15Right-handed alpha
Helix 39
39
G
19 27Right-handed alpha
Helix 40
40
G
28 37Right-handed alpha
Helix 41
41
G
43 54Right-handed alpha
Helix 42
42
G
79 91Right-handed alpha
Helix 43
43
G
102 107Right-handed alpha
Helix 44
44
H
5 17Right-handed alpha
Helix 45
45
H
19 28Right-handed alpha
Helix 46
46
H
28 37Right-handed alpha
Helix 47
47
H
43 55Right-handed alpha
Helix 48
48
H
79 92Right-handed alpha
Helix 49
49
H
102 107Right-handed 310
Helix 50
50
I
23 27Right-handed 310
Helix 51
51
I
28 46Right-handed alpha
Helix 52
52
I
48 66Right-handed alpha
Helix 53
53
I
69 84Right-handed alpha
Helix 54
54
I
96 106Right-handed alpha
Helix 55
55
I
110 115Right-handed 310
Helix 56
56
J
23 27Right-handed 310
Helix 57
57
J
28 46Right-handed alpha
Helix 58
58
J
48 66Right-handed alpha
Helix 59
59
J
69 85Right-handed alpha
Helix 60
60
J
96 106Right-handed alpha
Helix 61
61
J
110 115Right-handed 310
Helix 62
62
K
23 27Right-handed 310
Helix 63
63
K
28 44Right-handed alpha
Helix 64
64
K
48 66Right-handed alpha
Helix 65
65
K
69 84Right-handed alpha
Helix 66
66
K
96 106Right-handed alpha
Helix 67
67
K
110 115Right-handed 310
Helix 68
68
L
23 27Right-handed 310
Helix 69
69
L
28 46Right-handed alpha
Helix 70
70
L
48 66Right-handed alpha
Helix 71
71
L
69 84Right-handed alpha
Helix 72
72
L
96 106Right-handed alpha
Helix 73
73
L
110 115Right-handed 310
Helix 74
74
M
23 27Right-handed 310
Helix 75
75
M
28 44Right-handed alpha
Helix 76
76
M
48 66Right-handed alpha
Helix 77
77
M
69 85Right-handed alpha
Helix 78
78
M
96 106Right-handed alpha
Helix 79
79
M
110 115Right-handed 310
Helix 80
80
N
23 27Right-handed 310
Helix 81
81
N
28 44Right-handed alpha
Helix 82
82
N
48 66Right-handed alpha
Helix 83
83
N
69 84Right-handed alpha
Helix 84
84
N
96 106Right-handed alpha
Helix 85
85
N
110 115Right-handed 310
Helix 86
86
O
23 27Right-handed 310
Helix 87
87
O
28 44Right-handed alpha
Helix 88
88
O
48 66Right-handed alpha
Helix 89
89
O
69 84Right-handed alpha
Helix 90
90
O
96 106Right-handed alpha
Helix 91
91
O
110 115Right-handed 310
Helix 92
92
P
23 27Right-handed 310
Helix 93
93
P
28 46Right-handed alpha
Helix 94
94
P
48 66Right-handed alpha
Helix 95
95
P
69 85Right-handed alpha
Helix 96
96
P
96 106Right-handed alpha
Helix 97
97
P
110 115Right-handed 310
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There are 16 sheets in PDB entry 4JUR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 69first strand
Strand 2
A
75 77anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 99first strand
Strand 2
A
151 159anti-parallel
Strand 3
A
111 118anti-parallel
Strand 4
A
125 130anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 69first strand
Strand 2
B
75 77anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 99first strand
Strand 2
B
151 159anti-parallel
Strand 3
B
111 118anti-parallel
Strand 4
B
125 130anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
67 69first strand
Strand 2
C
75 77anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
96 99first strand
Strand 2
C
151 159anti-parallel
Strand 3
C
111 118anti-parallel
Strand 4
C
125 130anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
67 69first strand
Strand 2
D
75 77anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
96 98first strand
Strand 2
D
151 159anti-parallel
Strand 3
D
111 118anti-parallel
Strand 4
D
125 130anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
67 69first strand
Strand 2
E
75 77anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
96 99first strand
Strand 2
E
151 159anti-parallel
Strand 3
E
111 118anti-parallel
Strand 4
E
125 130anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
67 69first strand
Strand 2
F
75 77anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
96 99first strand
Strand 2
F
151 159anti-parallel
Strand 3
F
111 118anti-parallel
Strand 4
F
125 130anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
67 69first strand
Strand 2
G
75 77anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
96 98first strand
Strand 2
G
151 159anti-parallel
Strand 3
G
111 118anti-parallel
Strand 4
G
125 130anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
67 69first strand
Strand 2
H
75 77anti-parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
96 99first strand
Strand 2
H
151 159anti-parallel
Strand 3
H
111 118anti-parallel
Strand 4
H
125 130anti-parallel
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