Analysis of interatomic Contacts of Structural Units in PDB entry:
4JWH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JWH entry

There are 2 chains in PDB entry 4JWH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 84ARG 272
B
 ARG 86PRO 270
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 4JWH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
103 107Right-handed 310
Helix 2
2
A
108 129Right-handed alpha
Helix 3
3
A
141 153Right-handed alpha
Helix 4
4
A
154 159Right-handed 310
Helix 5
5
A
168 173Right-handed alpha
Helix 6
6
A
174 178Right-handed 310
Helix 7
7
A
213 223Right-handed alpha
Helix 8
8
A
244 259Right-handed alpha
Helix 9
9
A
260 269Right-handed alpha
Helix 10
10
B
103 107Right-handed 310
Helix 11
11
B
108 128Right-handed alpha
Helix 12
12
B
141 153Right-handed alpha
Helix 13
13
B
155 159Right-handed 310
Helix 14
14
B
168 174Right-handed alpha
Helix 15
15
B
175 178Right-handed 310
Helix 16
16
B
213 222Right-handed alpha
Helix 17
17
B
231 235Right-handed 310
Helix 18
18
B
244 259Right-handed alpha
Helix 19
19
B
260 269Right-handed alpha
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There are 2 sheets in PDB entry 4JWH. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 164first strand
Strand 2
A
134 138parallel
Strand 3
A
96 100parallel
Strand 4
A
199 203parallel
Strand 5
A
180 183parallel
Strand 6
A
225 227parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 164first strand
Strand 2
B
134 138parallel
Strand 3
B
96 100parallel
Strand 4
B
199 203parallel
Strand 5
B
180 183parallel
Strand 6
B
225 227parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il