Analysis of interatomic Contacts of Structural Units in PDB entry:
4JWO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JWO entry

There is 1 chain in PDB entry 4JWO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 55LYS 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4JWO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
68 83Right-handed alpha
Helix 2
2
A
94 104Right-handed alpha
Helix 3
3
A
117 127Right-handed alpha
Helix 4
4
A
157 165Right-handed alpha
Helix 5
5
A
172 176Right-handed 310
Helix 6
6
A
194 206Right-handed alpha
Helix 7
7
A
220 231Right-handed alpha
Helix 8
8
A
240 245Right-handed alpha
Helix 9
9
A
267 273Right-handed alpha
Helix 10
10
A
290 293Right-handed 310
Helix 11
11
A
294 306Right-handed alpha
Helix 12
12
A
306 316Right-handed alpha
Helix 13
13
A
322 338Right-handed alpha
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There are 3 sheets in PDB entry 4JWO. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 90first strand
Strand 2
A
58 64parallel
Strand 3
A
109 112parallel
Strand 4
A
280 288anti-parallel
Strand 5
A
131 145anti-parallel
Strand 6
A
234 239anti-parallel
Strand 7
A
186 189parallel
Strand 8
A
216 217parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 90first strand
Strand 2
A
58 64parallel
Strand 3
A
109 112parallel
Strand 4
A
280 288anti-parallel
Strand 5
A
131 145anti-parallel
Strand 6
A
251 252anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 156first strand
Strand 2
A
254 256parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il