Analysis of interatomic Contacts of Structural Units in PDB entry:
4JX0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JX0 entry

There are 2 chains in PDB entry 4JX0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 42ARG 343
B
 LYS 42ARG 343
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 4JX0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 55Right-handed alpha
Helix 2
2
A
112 117Right-handed alpha
Helix 3
3
A
118 123Right-handed alpha
Helix 4
4
A
129 131Right-handed 310
Helix 5
5
A
225 234Right-handed 310
Helix 6
6
B
45 55Right-handed alpha
Helix 7
7
B
112 116Right-handed 310
Helix 8
8
B
129 131Right-handed 310
Helix 9
9
B
225 234Right-handed 310
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There are 10 sheets in PDB entry 4JX0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 136first strand
Strand 2
A
146 153anti-parallel
Strand 3
A
89 96anti-parallel
Strand 4
A
59 64anti-parallel
Strand 5
A
180 182parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 84first strand
Strand 2
A
70 77anti-parallel
Strand 3
A
188 197parallel
Strand 4
A
165 173anti-parallel
Strand 5
A
104 110anti-parallel
Strand 6
A
138 140anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
306 327anti-parallel
Strand 3
A
250 267anti-parallel
Strand 4
A
219 222anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 214first strand
Strand 2
A
338 343anti-parallel
Strand 3
A
250 267anti-parallel
Strand 4
A
306 327anti-parallel
Strand 5
A
278 286anti-parallel
Strand 6
A
292 299anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 243first strand
Strand 2
A
335 336anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 136first strand
Strand 2
B
146 153anti-parallel
Strand 3
B
89 96anti-parallel
Strand 4
B
59 64anti-parallel
Strand 5
B
180 182parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 84first strand
Strand 2
B
70 77anti-parallel
Strand 3
B
188 197parallel
Strand 4
B
165 173anti-parallel
Strand 5
B
104 110anti-parallel
Strand 6
B
138 140anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 203first strand
Strand 2
B
306 327anti-parallel
Strand 3
B
250 267anti-parallel
Strand 4
B
219 222anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
213 214first strand
Strand 2
B
338 342anti-parallel
Strand 3
B
250 267anti-parallel
Strand 4
B
306 327anti-parallel
Strand 5
B
278 286anti-parallel
Strand 6
B
292 299anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
242 243first strand
Strand 2
B
335 336anti-parallel
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