Analysis of interatomic Contacts of Structural Units in PDB entry:
4JX1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JX1 entry

There are 2 chains in PDB entry 4JX1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 10VAL 414
B
 ASN 10LEU 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are101 helices in PDB entry 4JX1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 23Right-handed 310
Helix 2
2
A
33 36Right-handed 310
Helix 3
3
A
37 43Right-handed alpha
Helix 4
4
A
44 47Right-handed 310
Helix 5
5
A
57 61Right-handed 310
Helix 6
6
A
67 76Right-handed alpha
Helix 7
7
A
89 94Right-handed 310
Helix 8
8
A
106 120Right-handed alpha
Helix 9
9
A
120 143Right-handed alpha
Helix 10
10
A
150 154Right-handed alpha
Helix 11
11
A
156 167Right-handed alpha
Helix 12
12
A
170 172Right-handed 310
Helix 13
13
A
173 186Right-handed alpha
Helix 14
14
A
192 214Right-handed alpha
Helix 15
15
A
218 225Right-handed alpha
Helix 16
16
A
234 248Right-handed alpha
Helix 17
17
A
250 266Right-handed alpha
Helix 18
18
A
267 277Right-handed alpha
Helix 19
19
A
280 292Right-handed alpha
Helix 20
20
A
323 328Right-handed alpha
Helix 21
21
A
359 378Right-handed alpha
Helix 22
22
A
407 411Right-handed 310
Helix 23
23
B
19 23Right-handed 310
Helix 24
24
B
33 36Right-handed 310
Helix 25
25
B
37 43Right-handed alpha
Helix 26
26
B
44 47Right-handed 310
Helix 27
27
B
67 76Right-handed alpha
Helix 28
28
B
106 120Right-handed alpha
Helix 29
29
B
120 143Right-handed alpha
Helix 30
30
B
150 154Right-handed alpha
Helix 31
31
B
156 168Right-handed alpha
Helix 32
32
B
170 172Right-handed 310
Helix 33
33
B
173 186Right-handed alpha
Helix 34
34
B
192 214Right-handed alpha
Helix 35
35
B
218 225Right-handed alpha
Helix 36
36
B
234 248Right-handed alpha
Helix 37
37
B
250 266Right-handed alpha
Helix 38
38
B
267 277Right-handed alpha
Helix 39
39
B
280 292Right-handed alpha
Helix 40
40
B
352 356Right-handed 310
Helix 41
41
B
359 378Right-handed alpha
Helix 42
42
B
407 411Right-handed 310
Helix 43
43
C
22 30Right-handed alpha
Helix 44
44
C
64 72Right-handed alpha
Helix 45
45
C
91 95Right-handed 310
Helix 46
46
D
22 30Right-handed alpha
Helix 47
47
D
54 57Right-handed 310
Helix 48
48
D
64 72Right-handed alpha
Helix 49
49
D
91 95Right-handed 310
Helix 50
50
E
19 23Right-handed 310
Helix 51
51
E
33 36Right-handed 310
Helix 52
52
E
37 44Right-handed alpha
Helix 53
53
E
45 47Right-handed 310
Helix 54
54
E
57 61Right-handed 310
Helix 55
55
E
67 76Right-handed alpha
Helix 56
56
E
89 94Right-handed 310
Helix 57
57
E
106 120Right-handed alpha
Helix 58
58
E
120 143Right-handed alpha
Helix 59
59
E
150 154Right-handed alpha
Helix 60
60
E
156 168Right-handed alpha
Helix 61
61
E
170 172Right-handed 310
Helix 62
62
E
173 186Right-handed alpha
Helix 63
63
E
192 214Right-handed alpha
Helix 64
64
E
218 225Right-handed alpha
Helix 65
65
E
234 248Right-handed alpha
Helix 66
66
E
250 266Right-handed alpha
Helix 67
67
E
267 277Right-handed alpha
Helix 68
68
E
280 292Right-handed alpha
Helix 69
69
E
321 328Right-handed 310
Helix 70
70
E
352 356Right-handed 310
Helix 71
71
E
359 378Right-handed alpha
Helix 72
72
E
407 411Right-handed 310
Helix 73
73
F
19 23Right-handed 310
Helix 74
74
F
33 36Right-handed 310
Helix 75
75
F
37 44Right-handed alpha
Helix 76
76
F
45 47Right-handed 310
Helix 77
77
F
57 61Right-handed 310
Helix 78
78
F
67 76Right-handed alpha
Helix 79
79
F
90 95Right-handed alpha
Helix 80
80
F
106 120Right-handed alpha
Helix 81
81
F
120 143Right-handed alpha
Helix 82
82
F
150 154Right-handed alpha
Helix 83
83
F
156 168Right-handed alpha
Helix 84
84
F
170 172Right-handed 310
Helix 85
85
F
173 186Right-handed alpha
Helix 86
86
F
192 214Right-handed alpha
Helix 87
87
F
218 225Right-handed alpha
Helix 88
88
F
234 248Right-handed alpha
Helix 89
89
F
250 267Right-handed alpha
Helix 90
90
F
267 277Right-handed alpha
Helix 91
91
F
280 292Right-handed alpha
Helix 92
92
F
321 328Right-handed 310
Helix 93
93
F
359 378Right-handed alpha
Helix 94
94
F
407 411Right-handed 310
Helix 95
95
G
22 30Right-handed alpha
Helix 96
96
G
64 72Right-handed alpha
Helix 97
97
G
86 88Right-handed 310
Helix 98
98
G
91 95Right-handed 310
Helix 99
99
H
22 30Right-handed alpha
Helix 100
100
H
64 72Right-handed alpha
Helix 101
101
H
91 95Right-handed 310
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There are 24 sheets in PDB entry 4JX1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
62 65anti-parallel
Strand 3
A
317 319parallel
Strand 4
A
298 301anti-parallel
Strand 5
A
81 82anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 149first strand
Strand 2
A
403 405anti-parallel
Strand 3
A
382 383anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 228first strand
Strand 2
A
231 232anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 307first strand
Strand 2
A
310 312anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 392first strand
Strand 2
A
398 399anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 56first strand
Strand 2
B
62 65anti-parallel
Strand 3
B
317 319parallel
Strand 4
B
298 301anti-parallel
Strand 5
B
81 82anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 149first strand
Strand 2
B
403 405anti-parallel
Strand 3
B
382 383anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 228first strand
Strand 2
B
231 232anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
305 307first strand
Strand 2
B
310 312anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
391 392first strand
Strand 2
B
398 399anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 16first strand
Strand 2
C
2 6anti-parallel
Strand 3
C
97 100parallel
Strand 4
C
49 52anti-parallel
Strand 5
C
82 84anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 16first strand
Strand 2
D
2 6anti-parallel
Strand 3
D
97 100parallel
Strand 4
D
49 52anti-parallel
Strand 5
D
82 84anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
53 56first strand
Strand 2
E
62 65anti-parallel
Strand 3
E
317 319parallel
Strand 4
E
298 301anti-parallel
Strand 5
E
81 82anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
147 149first strand
Strand 2
E
403 405anti-parallel
Strand 3
E
382 383anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
227 228first strand
Strand 2
E
231 232anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
305 307first strand
Strand 2
E
310 312anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
391 392first strand
Strand 2
E
398 399anti-parallel
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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
53 56first strand
Strand 2
F
62 65anti-parallel
Strand 3
F
317 319parallel
Strand 4
F
298 301anti-parallel
Strand 5
F
81 82anti-parallel
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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
147 149first strand
Strand 2
F
403 405anti-parallel
Strand 3
F
382 383anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
227 228first strand
Strand 2
F
231 232anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
305 307first strand
Strand 2
F
310 312anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
391 392first strand
Strand 2
F
398 399anti-parallel
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There are 5 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
12 16first strand
Strand 2
G
2 6anti-parallel
Strand 3
G
97 100parallel
Strand 4
G
49 52anti-parallel
Strand 5
G
82 84anti-parallel
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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
12 16first strand
Strand 2
H
2 6anti-parallel
Strand 3
H
97 100parallel
Strand 4
H
49 52anti-parallel
Strand 5
H
82 84anti-parallel
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