Analysis of interatomic Contacts of Structural Units in PDB entry:
4JYX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JYX entry

There are 8 chains in PDB entry 4JYX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0ALA 323
B
 SER 0ALA 323
C
 ASN -5ALA 323
D
 ASN -5ALA 323
E
 ASN -5ALA 323
F
 ASN -5ALA 323
G
 SER 0ALA 323
H
 MET 1ALA 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are127 helices in PDB entry 4JYX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 24Right-handed alpha
Helix 2
2
A
29 41Right-handed alpha
Helix 3
3
A
46 59Right-handed alpha
Helix 4
4
A
64 88Right-handed alpha
Helix 5
5
A
98 104Right-handed alpha
Helix 6
6
A
104 126Right-handed alpha
Helix 7
7
A
128 153Right-handed alpha
Helix 8
8
A
159 171Right-handed alpha
Helix 9
9
A
171 186Right-handed alpha
Helix 10
10
A
189 215Right-handed alpha
Helix 11
11
A
228 233Right-handed alpha
Helix 12
12
A
237 247Right-handed alpha
Helix 13
13
A
248 262Right-handed alpha
Helix 14
14
A
268 279Right-handed alpha
Helix 15
15
A
279 299Right-handed alpha
Helix 16
16
A
305 319Right-handed alpha
Helix 17
17
B
2 24Right-handed alpha
Helix 18
18
B
29 41Right-handed alpha
Helix 19
19
B
46 59Right-handed alpha
Helix 20
20
B
64 89Right-handed alpha
Helix 21
21
B
98 104Right-handed alpha
Helix 22
22
B
104 126Right-handed alpha
Helix 23
23
B
128 153Right-handed alpha
Helix 24
24
B
159 171Right-handed alpha
Helix 25
25
B
171 186Right-handed alpha
Helix 26
26
B
189 215Right-handed alpha
Helix 27
27
B
228 233Right-handed alpha
Helix 28
28
B
237 247Right-handed alpha
Helix 29
29
B
248 262Right-handed alpha
Helix 30
30
B
268 279Right-handed alpha
Helix 31
31
B
279 299Right-handed alpha
Helix 32
32
B
305 318Right-handed alpha
Helix 33
33
C
0 25Right-handed alpha
Helix 34
34
C
29 41Right-handed alpha
Helix 35
35
C
46 59Right-handed alpha
Helix 36
36
C
64 85Right-handed alpha
Helix 37
37
C
99 125Right-handed alpha
Helix 38
38
C
128 153Right-handed alpha
Helix 39
39
C
159 171Right-handed alpha
Helix 40
40
C
171 186Right-handed alpha
Helix 41
41
C
189 215Right-handed alpha
Helix 42
42
C
229 234Right-handed alpha
Helix 43
43
C
237 247Right-handed alpha
Helix 44
44
C
248 262Right-handed alpha
Helix 45
45
C
267 278Right-handed alpha
Helix 46
46
C
279 298Right-handed alpha
Helix 47
47
C
305 319Right-handed alpha
Helix 48
48
C
320 323Right-handed 310
Helix 49
49
D
0 25Right-handed alpha
Helix 50
50
D
29 42Right-handed alpha
Helix 51
51
D
46 59Right-handed alpha
Helix 52
52
D
64 85Right-handed alpha
Helix 53
53
D
99 126Right-handed alpha
Helix 54
54
D
128 153Right-handed alpha
Helix 55
55
D
159 171Right-handed alpha
Helix 56
56
D
171 186Right-handed alpha
Helix 57
57
D
189 215Right-handed alpha
Helix 58
58
D
229 234Right-handed alpha
Helix 59
59
D
237 247Right-handed alpha
Helix 60
60
D
248 262Right-handed alpha
Helix 61
61
D
267 278Right-handed alpha
Helix 62
62
D
279 299Right-handed alpha
Helix 63
63
D
305 319Right-handed alpha
Helix 64
64
D
320 323Right-handed 310
Helix 65
65
E
0 26Right-handed alpha
Helix 66
66
E
29 42Right-handed alpha
Helix 67
67
E
46 59Right-handed alpha
Helix 68
68
E
64 84Right-handed alpha
Helix 69
69
E
99 126Right-handed alpha
Helix 70
70
E
128 153Right-handed alpha
Helix 71
71
E
159 171Right-handed alpha
Helix 72
72
E
171 186Right-handed alpha
Helix 73
73
E
190 215Right-handed alpha
Helix 74
74
E
229 234Right-handed alpha
Helix 75
75
E
237 246Right-handed alpha
Helix 76
76
E
248 262Right-handed alpha
Helix 77
77
E
267 279Right-handed alpha
Helix 78
78
E
279 299Right-handed alpha
Helix 79
79
E
305 319Right-handed alpha
Helix 80
80
F
-5 -1Right-handed 310
Helix 81
81
F
0 26Right-handed alpha
Helix 82
82
F
29 41Right-handed alpha
Helix 83
83
F
46 59Right-handed alpha
Helix 84
84
F
64 85Right-handed alpha
Helix 85
85
F
99 126Right-handed alpha
Helix 86
86
F
128 153Right-handed alpha
Helix 87
87
F
159 171Right-handed alpha
Helix 88
88
F
171 186Right-handed alpha
Helix 89
89
F
189 215Right-handed alpha
Helix 90
90
F
229 234Right-handed alpha
Helix 91
91
F
237 247Right-handed alpha
Helix 92
92
F
248 262Right-handed alpha
Helix 93
93
F
267 278Right-handed alpha
Helix 94
94
F
279 298Right-handed alpha
Helix 95
95
F
305 319Right-handed alpha
Helix 96
96
G
2 24Right-handed alpha
Helix 97
97
G
29 41Right-handed alpha
Helix 98
98
G
46 59Right-handed alpha
Helix 99
99
G
64 88Right-handed alpha
Helix 100
100
G
98 104Right-handed alpha
Helix 101
101
G
104 126Right-handed alpha
Helix 102
102
G
128 153Right-handed alpha
Helix 103
103
G
159 171Right-handed alpha
Helix 104
104
G
171 186Right-handed alpha
Helix 105
105
G
189 215Right-handed alpha
Helix 106
106
G
228 233Right-handed alpha
Helix 107
107
G
237 247Right-handed alpha
Helix 108
108
G
248 262Right-handed alpha
Helix 109
109
G
268 279Right-handed alpha
Helix 110
110
G
279 299Right-handed alpha
Helix 111
111
G
305 319Right-handed alpha
Helix 112
112
H
2 24Right-handed alpha
Helix 113
113
H
29 41Right-handed alpha
Helix 114
114
H
46 59Right-handed alpha
Helix 115
115
H
64 89Right-handed alpha
Helix 116
116
H
98 104Right-handed alpha
Helix 117
117
H
104 126Right-handed alpha
Helix 118
118
H
128 153Right-handed alpha
Helix 119
119
H
159 171Right-handed alpha
Helix 120
120
H
171 186Right-handed alpha
Helix 121
121
H
189 216Right-handed alpha
Helix 122
122
H
228 233Right-handed alpha
Helix 123
123
H
237 247Right-handed alpha
Helix 124
124
H
248 262Right-handed alpha
Helix 125
125
H
268 279Right-handed alpha
Helix 126
126
H
279 299Right-handed alpha
Helix 127
127
H
305 319Right-handed alpha
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There are 3 sheets in PDB entry 4JYX. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 93first strand
Strand 2
B
96 97anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
92 93first strand
Strand 2
G
96 97anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
92 93first strand
Strand 2
H
96 97anti-parallel
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