Analysis of interatomic Contacts of Structural Units in PDB entry:
4JZ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JZ6 entry

There is 1 chain in PDB entry 4JZ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0PHE 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4JZ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 57Right-handed alpha
Helix 2
2
A
60 78Right-handed alpha
Helix 3
3
A
78 91Right-handed alpha
Helix 4
4
A
93 114Right-handed alpha
Helix 5
5
A
115 117Right-handed 310
Helix 6
6
A
152 165Right-handed alpha
Helix 7
7
A
177 192Right-handed alpha
Helix 8
8
A
207 217Right-handed alpha
Helix 9
9
A
229 243Right-handed alpha
Helix 10
10
A
264 278Right-handed alpha
Helix 11
11
A
279 282Right-handed 310
Helix 12
12
A
294 311Right-handed alpha
Helix 13
13
A
331 346Right-handed alpha
Helix 14
14
A
373 377Right-handed 310
Helix 15
15
A
392 402Right-handed alpha
Helix 16
16
A
415 426Right-handed alpha
Helix 17
17
A
449 451Right-handed 310
Helix 18
18
A
461 466Right-handed alpha
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There are 5 sheets in PDB entry 4JZ6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1 3first strand
Strand 2
A
30 35parallel
Strand 3
A
19 23anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 7first strand
Strand 2
A
10 12anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 123first strand
Strand 2
A
131 137anti-parallel
Strand 3
A
468 474anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 201first strand
Strand 2
A
169 172parallel
Strand 3
A
142 145parallel
Strand 4
A
223 227parallel
Strand 5
A
247 250parallel
Strand 6
A
453 454anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 352first strand
Strand 2
A
364 367anti-parallel
Strand 3
A
384 390parallel
Strand 4
A
289 293parallel
Strand 5
A
256 259parallel
Strand 6
A
408 412parallel
Strand 7
A
430 433parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il