Analysis of interatomic Contacts of Structural Units in PDB entry:
4JZA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JZA entry

There are 2 chains in PDB entry 4JZA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1HIS 824
B
 GLY 2ILE 421
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 4JZA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 27Right-handed alpha
Helix 2
2
A
40 63Right-handed alpha
Helix 3
3
A
73 88Right-handed alpha
Helix 4
4
A
94 117Right-handed alpha
Helix 5
5
A
121 141Right-handed alpha
Helix 6
6
A
171 184Right-handed alpha
Helix 7
7
A
190 195Right-handed alpha
Helix 8
8
A
197 207Right-handed alpha
Helix 9
9
A
213 235Right-handed alpha
Helix 10
10
A
237 248Right-handed alpha
Helix 11
11
A
253 258Right-handed alpha
Helix 12
12
A
260 271Right-handed alpha
Helix 13
13
A
273 289Right-handed alpha
Helix 14
14
A
292 297Right-handed alpha
Helix 15
15
A
299 306Right-handed 310
Helix 16
16
A
307 312Right-handed alpha
Helix 17
17
A
314 326Right-handed alpha
Helix 18
18
A
330 335Right-handed 310
Helix 19
19
A
380 384Right-handed 310
Helix 20
20
A
387 403Right-handed alpha
Helix 21
21
A
429 433Right-handed 310
Helix 22
22
A
440 455Right-handed alpha
Helix 23
23
A
481 493Right-handed alpha
Helix 24
24
A
500 514Right-handed alpha
Helix 25
25
A
523 543Right-handed alpha
Helix 26
26
A
555 575Right-handed alpha
Helix 27
27
A
586 603Right-handed alpha
Helix 28
28
A
603 613Right-handed alpha
Helix 29
29
A
621 626Right-handed alpha
Helix 30
30
A
627 638Right-handed alpha
Helix 31
31
A
642 653Right-handed alpha
Helix 32
32
A
654 662Right-handed 310
Helix 33
33
A
675 703Right-handed alpha
Helix 34
34
A
704 709Right-handed 310
Helix 35
35
A
713 717Right-handed 310
Helix 36
36
A
719 723Right-handed 310
Helix 37
37
A
730 741Right-handed alpha
Helix 38
38
A
747 762Right-handed alpha
Helix 39
39
A
771 783Right-handed alpha
Helix 40
40
A
793 818Right-handed alpha
Helix 41
41
B
16 27Right-handed alpha
Helix 42
42
B
40 63Right-handed alpha
Helix 43
43
B
73 88Right-handed alpha
Helix 44
44
B
94 117Right-handed alpha
Helix 45
45
B
121 141Right-handed alpha
Helix 46
46
B
171 184Right-handed alpha
Helix 47
47
B
190 196Right-handed alpha
Helix 48
48
B
197 206Right-handed alpha
Helix 49
49
B
213 235Right-handed alpha
Helix 50
50
B
237 247Right-handed alpha
Helix 51
51
B
253 258Right-handed alpha
Helix 52
52
B
260 271Right-handed alpha
Helix 53
53
B
276 289Right-handed alpha
Helix 54
54
B
292 297Right-handed alpha
Helix 55
55
B
302 306Right-handed 310
Helix 56
56
B
307 312Right-handed alpha
Helix 57
57
B
314 326Right-handed alpha
Helix 58
58
B
330 335Right-handed 310
Helix 59
59
B
380 384Right-handed 310
Helix 60
60
B
387 403Right-handed alpha
Helix 61
61
B
440 455Right-handed alpha
Helix 62
62
B
481 493Right-handed alpha
Helix 63
63
B
500 514Right-handed alpha
Helix 64
64
B
523 543Right-handed alpha
Helix 65
65
B
555 575Right-handed alpha
Helix 66
66
B
586 603Right-handed alpha
Helix 67
67
B
603 613Right-handed alpha
Helix 68
68
B
621 626Right-handed alpha
Helix 69
69
B
627 638Right-handed alpha
Helix 70
70
B
642 653Right-handed alpha
Helix 71
71
B
654 661Right-handed 310
Helix 72
72
B
675 703Right-handed alpha
Helix 73
73
B
704 709Right-handed 310
Helix 74
74
B
713 717Right-handed 310
Helix 75
75
B
719 723Right-handed 310
Helix 76
76
B
730 740Right-handed alpha
Helix 77
77
B
747 762Right-handed alpha
Helix 78
78
B
771 784Right-handed alpha
Helix 79
79
B
793 818Right-handed alpha
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There are 6 sheets in PDB entry 4JZA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
A
5 10parallel
Strand 3
A
144 150parallel
Strand 4
A
159 166anti-parallel
Strand 5
A
352 359anti-parallel
Strand 6
A
365 367anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
A
5 10parallel
Strand 3
A
144 150parallel
Strand 4
A
159 166anti-parallel
Strand 5
A
352 359anti-parallel
Strand 6
A
372 374anti-parallel
Strand 7
A
545 549parallel
Strand 8
A
412 416parallel
Strand 9
A
462 465parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
469 470first strand
Strand 2
A
474 475anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 35first strand
Strand 2
B
5 10parallel
Strand 3
B
144 150parallel
Strand 4
B
159 166anti-parallel
Strand 5
B
352 359anti-parallel
Strand 6
B
365 367anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 35first strand
Strand 2
B
5 10parallel
Strand 3
B
144 150parallel
Strand 4
B
159 166anti-parallel
Strand 5
B
352 359anti-parallel
Strand 6
B
372 374anti-parallel
Strand 7
B
545 550parallel
Strand 8
B
412 417parallel
Strand 9
B
462 465parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
469 470first strand
Strand 2
B
474 475anti-parallel
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