Analysis of interatomic Contacts of Structural Units in PDB entry:
4K0D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4K0D entry

There are 2 chains in PDB entry 4K0D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 37ALA 179
B
 ILE 37GLN 181
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4K0D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 46Right-handed alpha
Helix 2
2
A
47 75Right-handed alpha
Helix 3
3
A
77 101Right-handed alpha
Helix 4
4
A
104 134Right-handed alpha
Helix 5
5
A
137 146Right-handed alpha
Helix 6
6
A
147 179Right-handed alpha
Helix 7
7
B
38 46Right-handed alpha
Helix 8
8
B
47 75Right-handed alpha
Helix 9
9
B
77 101Right-handed alpha
Helix 10
10
B
104 135Right-handed alpha
Helix 11
11
B
137 147Right-handed alpha
Helix 12
12
B
148 178Right-handed alpha
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There are no sheets in PDB entry 4K0D
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il