Analysis of interatomic Contacts of Structural Units in PDB entry:
4K51


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4K51 entry

There are 2 chains in PDB entry 4K51 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 278LYS 493
B
THR 278GLU 475
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 4K51. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
278 294Right-handed alpha
Helix 2
2
A
295 313Right-handed alpha
Helix 3
3
A
317 334Right-handed alpha
Helix 4
4
A
348 355Right-handed alpha
Helix 5
5
A
362 372Right-handed alpha
Helix 6
6
A
373 378Right-handed alpha
Helix 7
7
A
381 393Right-handed alpha
Helix 8
8
A
399 412Right-handed alpha
Helix 9
9
A
417 419Right-handed 310
Helix 10
10
A
420 440Right-handed alpha
Helix 11
11
A
445 453Right-handed alpha
Helix 12
12
A
455 459Right-handed 310
Helix 13
13
A
461 475Right-handed alpha
Helix 14
14
B
279 294Right-handed alpha
Helix 15
15
B
295 313Right-handed alpha
Helix 16
16
B
317 334Right-handed alpha
Helix 17
17
B
381 393Right-handed alpha
Helix 18
18
B
399 412Right-handed alpha
Helix 19
19
B
417 419Right-handed 310
Helix 20
20
B
420 438Right-handed alpha
Helix 21
21
B
444 453Right-handed alpha
Helix 22
22
B
455 459Right-handed 310
Helix 23
23
B
461 475Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4K51.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
442 444first strand
Strand 2
A
488 490anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il