Analysis of interatomic Contacts of Structural Units in PDB entry:
4K7Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4K7Q entry

There is 1 chain in PDB entry 4K7Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7LYS 1036
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 46 helices in PDB entry 4K7Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 29Right-handed alpha
Helix 2
2
A
53 59Right-handed alpha
Helix 3
3
A
61 68Right-handed alpha
Helix 4
4
A
99 112Right-handed alpha
Helix 5
5
A
114 118Right-handed 310
Helix 6
6
A
119 124Right-handed alpha
Helix 7
7
A
150 159Right-handed alpha
Helix 8
8
A
162 167Right-handed alpha
Helix 9
9
A
168 172Right-handed 310
Helix 10
10
A
189 196Right-handed alpha
Helix 11
11
A
199 211Right-handed alpha
Helix 12
12
A
242 248Right-handed alpha
Helix 13
13
A
262 265Right-handed alpha
Helix 14
14
A
299 312Right-handed alpha
Helix 15
15
A
313 317Right-handed 310
Helix 16
16
A
329 357Right-handed alpha
Helix 17
17
A
363 365Right-handed 310
Helix 18
18
A
366 387Right-handed alpha
Helix 19
19
A
392 423Right-handed alpha
Helix 20
20
A
427 435Right-handed alpha
Helix 21
21
A
435 458Right-handed alpha
Helix 22
22
A
463 485Right-handed alpha
Helix 23
23
A
487 494Right-handed alpha
Helix 24
24
A
514 525Right-handed alpha
Helix 25
25
A
525 537Right-handed alpha
Helix 26
26
A
538 558Right-handed alpha
Helix 27
27
A
583 601Right-handed alpha
Helix 28
28
A
633 637Right-handed 310
Helix 29
29
A
639 642Right-handed 310
Helix 30
30
A
643 659Right-handed alpha
Helix 31
31
A
691 709Right-handed alpha
Helix 32
32
A
732 740Right-handed alpha
Helix 33
33
A
742 755Right-handed alpha
Helix 34
34
A
776 780Right-handed 310
Helix 35
35
A
782 788Right-handed 310
Helix 36
36
A
801 805Right-handed alpha
Helix 37
37
A
836 849Right-handed alpha
Helix 38
38
A
872 881Right-handed alpha
Helix 39
39
A
882 888Right-handed alpha
Helix 40
40
A
896 903Right-handed 310
Helix 41
41
A
904 919Right-handed alpha
Helix 42
42
A
924 955Right-handed alpha
Helix 43
43
A
962 969Right-handed alpha
Helix 44
44
A
971 986Right-handed alpha
Helix 45
45
A
998 1013Right-handed alpha
Helix 46
46
A
1025 1033Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 4K7Q. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 131first strand
Strand 2
A
42 48anti-parallel
Strand 3
A
87 94anti-parallel
Strand 4
A
75 83anti-parallel
Strand 5
A
815 819anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
284 292anti-parallel
Strand 3
A
136 144anti-parallel
Strand 4
A
321 324anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
284 292anti-parallel
Strand 3
A
278 281anti-parallel
Strand 4
A
606 615anti-parallel
Strand 5
A
620 631anti-parallel
Strand 6
A
571 577anti-parallel
Strand 7
A
662 666anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 272first strand
Strand 2
A
182 188anti-parallel
Strand 3
A
767 773parallel
Strand 4
A
757 764anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
232 233anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 253first strand
Strand 2
A
259 261anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
715 718first strand
Strand 2
A
824 830anti-parallel
Strand 3
A
679 686anti-parallel
Strand 4
A
855 859anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
724 729first strand
Strand 2
A
807 812anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
790 792first strand
Strand 2
A
798 800anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il